Query= MSMg01no438_i14.b1 MSMg01no438_i14.b1 CHROMAT_FILE:
MSMg01no438_i14.b1 PHD_FILE: MSMg01no438_i14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:04:21 2005
(446 letters)
>mm_chr7_122259532_122260377
Length = 846
Score = 799 bits (413), Expect = 0.0
Identities = 436/444 (98%), Gaps = 2/444 (0%)
Strand = Plus / Minus
Query: 4 ggaattcagccttttttc-tctttgtttctcttgattcttttgcccaataccaagcttct 62
||||||||||| |||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 646 ggaattcagcc-tttttcttatttgtttctcttgattcttttgcccaataccaagcttct 588
Query: 63 attgaaatcacttaacccaaaatggtgaccttgctgatccatttgagactccaggattgt 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 attgaaatcacttaacccaaaatggtgaccttgctgatccatttgagactccaggattgt 528
Query: 123 ccaggcagctggaatcttatttctatacacaggattactcagacaagccttgcctgtctt 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 ccaggcagctggaatcttatttctatacacaggattactcagacaagccttgcctgtctt 468
Query: 183 atcctccatcactctatctgaactctgccctattctagtagntgagtttgcctttccagt 242
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 467 atcctccatcactctatctgaactctgccctattctagtagttgagtttgcctttccagt 408
Query: 243 gtcagccggttcaaggagccagctgtgcctttggaattgtgtgagttgccatccaagata 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 gtcagccggttcaaggagccagctgtgcctttggaattgtgtgagttgccatccaagata 348
Query: 303 ctggatgatagagctcctgcatatcagctactctgccagggactggcaccccaagagtga 362
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 347 ctggatgatagagctcctgcatatcagctactctgccagggactggcgccccaagagtga 288
Query: 363 acaagacaccgccccctttgctataatggcatgccataggggacaggcgtgaaataaggg 422
||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 acaagacactgcagcctttgctataatggcatgccataggggacaggcgtgaaataaggg 228
Query: 423 cacaacttcacataagatcccatc 446
||||||||||||||||||||||||
Sbjct: 227 cacaacttcacataagatcccatc 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 446
Length of database: 846
Length adjustment: 10
Effective length of query: 436
Effective length of database: 836
Effective search space: 364496
Effective search space used: 364496
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no438_i14.g1 MSMg01no438_i14.g1 CHROMAT_FILE:
MSMg01no438_i14.g1 PHD_FILE: MSMg01no438_i14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:04:21 2005
(217 letters)
>mm_chr7_122045461_122046078
Length = 618
Score = 352 bits (182), Expect = e-102
Identities = 209/218 (95%), Gaps = 1/218 (0%)
Strand = Plus / Plus
Query: 1 ctaagaaaattgtgtaccataaaaatatgtaaaaattggttgtta-ggttatttttatga 59
||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 201 ctaagaaaactgtgtaccataaaaatatgtaaaaattggttgttatggttatttttatga 260
Query: 60 catttaatcgagaaccaattcaatgccaatatttttcaaataagatataataaaaatcct 119
|||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 261 catttaattgagaaccaattcaatgccaatatttttcaaataaaatataataaaaatcct 320
Query: 120 acagtagactggtacccagagaatcagaatgatgcctattgaaacattgtgaaatactct 179
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
Sbjct: 321 acagtagactggtacccagagaatcagaatgatgcctattgtaacattgtgaaatactat 380
Query: 180 tagtataaaaggtaggttataaaaatctgtattatggg 217
||| |||||||||||||||||||||||| ||| |||||
Sbjct: 381 taggataaaaggtaggttataaaaatctctatgatggg 418
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 217
Length of database: 618
Length adjustment: 9
Effective length of query: 208
Effective length of database: 609
Effective search space: 126672
Effective search space used: 126672
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
