Query= MSMg01no438_o22.b1 MSMg01no438_o22.b1 CHROMAT_FILE:
MSMg01no438_o22.b1 PHD_FILE: MSMg01no438_o22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:04:53 2005
(340 letters)
>mm_chr7_90651239_90651978
Length = 740
Score = 642 bits (332), Expect = 0.0
Identities = 338/340 (99%)
Strand = Plus / Plus
Query: 1 cagactcatgtggctctcgcccgagagagagatggaaaaattcagttgacaggagataga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagactcatgtggctctcgcccgagagagagatggaaaaattcagttgacaggagataga 260
Query: 61 atgtctgcagtatattaaaacatgccacaaatggacttaaatctctgtgttcacagtaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgtctgcagtatattaaaacatgccacaaatggacttaaatctctgtgttcacagtaat 320
Query: 121 ccttctgaaaggtactgttcatgcttgggaaacactgagaaattaacttttctggaagtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccttctgaaaggtactgttcatgcttgggaaacactgagaaattaacttttctggaagtg 380
Query: 181 atgtcgattagttcttattgtcaacttgacacatcgtagaattatctgagaatagggagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgtcgattagttcttattgtcaacttgacacatcgtagaattatctgagaatagggagc 440
Query: 241 ctgaggtgattaattacccagatcagattgaccagtgactaatgcttgatgtgtgagggc 300
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctgaggtgaagaattacccagatcagattgaccagtgactaatgcttgatgtgtgagggc 500
Query: 301 ctggcctgctgctgtaggtggcaccattcctagacaggtg 340
||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctggcctgctgctgtaggtggcaccattcctagacaggtg 540
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 340
Length of database: 740
Length adjustment: 9
Effective length of query: 331
Effective length of database: 731
Effective search space: 241961
Effective search space used: 241961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no438_o22.g1 MSMg01no438_o22.g1 CHROMAT_FILE:
MSMg01no438_o22.g1 PHD_FILE: MSMg01no438_o22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:04:53 2005
(402 letters)
>mm_chr7_90829018_90829825
Length = 808
Score = 644 bits (333), Expect = 0.0
Identities = 386/409 (94%), Gaps = 12/409 (2%)
Strand = Plus / Minus
Query: 3 cttccccctttgagtcttcgagttctagacttcttgcctactgcacagtcatgcctagcg 62
|||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||
Sbjct: 608 cttccccctttgagtctttgagttctagacttcttgcctactgcacactcatgcctagcg 549
Query: 63 caagcagggcttttggaaaatgtgctttgagctgaacacaattttatagtgatgtctcga 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 caagcagggcttttggaaaatgtgctttgagctgaacacaattttatagtgatgtctcga 489
Query: 123 actcagctcaaggtcttgcttggcctttgagactaattctgggggcagtgtggtgtgtga 182
|||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 488 actcagctcaaggtcttgcttgacctttgagactaattctgagggcagtgtggtgtgtga 429
Query: 183 cgctactgccttcacaaaggctcaccagccaggtcacttggagcaaagcttcctgc---- 238
| |||||| ||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 428 tgttactgctttcacaaaggctcaccagccaggtcacttggaggaaagcttcctgcataa 369
Query: 239 --caccatatctgattgta---tcttctcgaatcaccctccagctcttatactgctggcc 293
|||||||||||| || | || ||| ||||||||||||||||||||||||||||||
Sbjct: 368 gccaccatatctgaatg-acactc--ctcaaatcaccctccagctcttatactgctggcc 312
Query: 294 cctgggagacagagagtggggctcttctccttggctgatttcacaggtggctcatttctg 353
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 cctgggagacagagagtggggctcttctccttggctgatttcacaggtggctcatttcta 252
Query: 354 ccctctcgggttcttcattacagggcactgcaagaccaactcggtcact 402
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 ccctctcgggttcttcattacagggcactgcaagaccaactcggtcact 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 402
Length of database: 808
Length adjustment: 9
Effective length of query: 393
Effective length of database: 799
Effective search space: 314007
Effective search space used: 314007
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
