Query= MSMg01no439_o17.b1 MSMg01no439_o17.b1 CHROMAT_FILE:
MSMg01no439_o17.b1 PHD_FILE: MSMg01no439_o17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:06:10 2005
(437 letters)
>mm_chr7_73531717_73532553
Length = 837
Score = 615 bits (318), Expect = e-180
Identities = 348/358 (97%), Gaps = 2/358 (0%)
Strand = Plus / Minus
Query: 1 cattgttcttgctcatgttccagaagaatatagcataccaacacctaatttgtccttaga 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 cattgtccttgctcatgttccagaagaatatagcataccaacacctaatttgtccttaga 298
Query: 61 ggggctttt-tgagtcagccaaacgtttccttcccccacacctgcaacagtctccttaat 119
||||||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 297 ggggcttttct-agtcagccaaacgtttccttcccccacacctacaacagtctccttaat 239
Query: 120 agcttggatataattattataactaactaaataaaccagctaaggagatggctcagtata 179
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 agtttggatataattattataactaactaaataaaccagctaaggagatggctcagtata 179
Query: 180 caaagcacttgctggtcacgtgtgaggatctgaattcagattcagaatccgcttaaagcc 239
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 caaagcacttgctgatcacgtgtgaggatctgaattcagattcagaatccgcttaaagcc 119
Query: 240 agatgatataaaggtgcaatcccagatgcccccacttcaagatgggagattccctggaag 299
|||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 agatgagacaaaggtgcaatcccagatgcccccacttcaagatgggagattccctggaag 59
Query: 300 ctcactggtcagctagctttgtgtaggcaacgtgaagaagaagccttgtctcaaacat 357
|||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||
Sbjct: 58 ctcactggtcagctagctttgtgtgggcaacatgaagaagaagccttgtctcaaacat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 437
Length of database: 837
Length adjustment: 9
Effective length of query: 428
Effective length of database: 828
Effective search space: 354384
Effective search space used: 354384
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no439_o17.g1 MSMg01no439_o17.g1 CHROMAT_FILE:
MSMg01no439_o17.g1 PHD_FILE: MSMg01no439_o17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:06:10 2005
(207 letters)
>mm_chr7_73343337_73343943
Length = 607
Score = 369 bits (191), Expect = e-107
Identities = 203/207 (98%)
Strand = Plus / Plus
Query: 1 aaggccgacttaaatttcggtttcatgtttcgcccacttaacaagatgggaagaatttcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaggccgacttaaatttcggtttcatgtttcgcccacttaacaagatgggaagaatttcc 260
Query: 61 tgtgtgtggtgttttgctctgtgactctccacgatgatggttttccctatctcaaataat 120
||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||
Sbjct: 261 tgtgtgtggtgttttgctctgtgactctccacgatgatggtttcccctatttcaaataat 320
Query: 121 gagtagaggagtttggggccggcgagatggctcagtggataaagctgcttgctctcaagc 180
|||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 321 gagtagaggactttggggccggcgagatggctcagtgggtaaagctgcttgctctcaagc 380
Query: 181 ccggtgggctccgtttgatcctcaggc 207
|||||||||||||||||||||||||||
Sbjct: 381 ccggtgggctccgtttgatcctcaggc 407
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 207
Length of database: 607
Length adjustment: 9
Effective length of query: 198
Effective length of database: 598
Effective search space: 118404
Effective search space used: 118404
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
