Query= MSMg01no439_p13.b1 MSMg01no439_p13.b1 CHROMAT_FILE:
MSMg01no439_p13.b1 PHD_FILE: MSMg01no439_p13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:06:14 2005
(166 letters)
>mm_chr7_56276127_56276692
Length = 566
Score = 292 bits (151), Expect = 7e-84
Identities = 161/167 (96%), Gaps = 6/167 (3%)
Strand = Plus / Plus
Query: 1 attccctgctcttcc---gccctctgcaaagggctggcttctccaccatcactgtcttct 57
||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attccctgctc---cagagccctctgcaaagggctggcttctccaccatcactgtcttct 257
Query: 58 ttggttcagaaggagtacatacaggggcaatcttcctcagtaaagaggaactttccagag 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 ttggttcagaaggagtacatacaggggcaatcttcctcagtaaagaggaactttccagag 317
Query: 118 ctacacaacaggtggggacagctgtgcctgccaacaaagctggctgg 164
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 ctacacaacaggtggggacagctgtgcctgccaacaaagctggctgg 364
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 166
Length of database: 566
Length adjustment: 8
Effective length of query: 158
Effective length of database: 558
Effective search space: 88164
Effective search space used: 88164
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no439_p13.g1 MSMg01no439_p13.g1 CHROMAT_FILE:
MSMg01no439_p13.g1 PHD_FILE: MSMg01no439_p13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:06:14 2005
(264 letters)
>mm_chr7_56425075_56425738
Length = 664
Score = 482 bits (249), Expect = e-140
Identities = 261/265 (98%), Gaps = 2/265 (0%)
Strand = Plus / Minus
Query: 1 agttaggggaagcaaaagagccatccttctcccctcccccacctcccagccaggtcataa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 agttaggggaagcaaaagagccatccttctcccctcccccacctcccagccaggtcataa 405
Query: 61 acacaagcagattattttcctagcacagcgagcatcacagcgagcatctctgtgggcccc 120
||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 acacaagcaga-tatttccctagcacagcgagcatcacagcgagcatctctgtgggcccc 346
Query: 121 -ttcagaaagctgtgctactcaggatcatagtgaaacaggaagggggatgaccccgggtc 179
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 345 tttcagaaagctgtgctactcaggaccatagtgaaacaggaagggggatgaccccgggtc 286
Query: 180 cacaggcgctcacacggagtgtcagcctttgcatctcacaggagccttctgtggaaggct 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 cacaggcgctcacacggagtgtcagcctttgcatctcacaggagccttctgtggaaggct 226
Query: 240 ggactgaatttacagatgaagacca 264
|||||||||||||||||||||||||
Sbjct: 225 ggactgaatttacagatgaagacca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 264
Length of database: 664
Length adjustment: 9
Effective length of query: 255
Effective length of database: 655
Effective search space: 167025
Effective search space used: 167025
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
