ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCATTCTACTGTCTCAAAGATTCTCAGTACCCATGTTCGTGGCTTACTG
CCTCTTGTAACTCTGGTTCCAGAGGATCTAATGGCTTCATTAGGTACCCA
CACACACGTGCACAAACCTACACACACTTTTTTTTTTCTCTCTCTCTCTT
AAAAATAAGATAAATCTTTAAATTTTTATTGCTTTTTTTCTTTGATAATT
TTATTTATGTACATACTAAATTTGGGCATCTTAACCCTTCTGCTATCTTC
TCTTATCTTCCAACTTCCTCTGAACCTTTGTTTTCAATAAGCGTCTTCCC
ATCTTGATGTCTTTTCTTGTTTCTGACCCACTGAGTTAATTATGGTTGCT
TCCATAAACATAGATTACAGTTATTTCCTGGAACATAGGCAAGTCATAAG
TGACTGAAAAAAAAATGACACCCTTTCCCCAGCCAGAGTTAATGGCCATT
GTCTCTCACTGATGGGTGAAGAGATTTCTGGAGCCCCTTCCCAGTGCATG
CTGAATGATGATACAGGTAAGCACAGTAGCCGTGAGTTTCTGAGTGTAAT
GGCTGCATCATGTCAGAAGGCACTGTTTCACAGCAGGCCTCCCTAGCTGC
TGTCTCTATGACGTTCCTGAGACTTGAACGCAGTGATCTACATACACCTT
TTATTGCCAGGGACCCGAAACTTGAATTATTCCCCCGAAATTGGGACAAA
AAACTGGCTACTGTAAAAAGGTTCATTGAATGAACTGTAAAA

TGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXTTTGGAACTCGCTTTGTAAACCAGGCTGG
CCTCCAGAACTCAAGAGATCCTCTTGCCTCTGCCTCCTTAGTGCTGAGAT
TAAAGGCAGAGTTTTATTTTCACAATATTTGGTATATAATATCTACTGTA
TAAATATACTGAATGAGAAACAAATACTCTTTATATAACTATCTACTAAA
TGAAGGATCCTCCTCTAAAGACTATATAAGAATTTGTTTCAAACATAGGA
CTCTAAAAATAATTACACTCTAATGGGGTATAGTGGTACATAACTTTAAT
CCCAACACCTGGAGGGCAGAGGCAGGTGAGACCAAAGTCAGCCTGGTCTA
CACAATAGTGCCAAACCTACACAGAGACAGCACTTCTCAACATAATGTGT
GAGTGTCTATGTGTAAACATGTATACACAGAAACACACACACACACACAC
AGACACACACAGACACACACAGACACACACACAGACACACAGACACACAC
ACACACACACACACACACACACAGAGTTATAGACAATGTTTTTTTTTTAA
AATTCCAGTTATCTTAATTTCAGGTTTAAATTCAGAAGAATTACCTTGAT
CAAAGAGTCCTACCAGAGAAAGTGCTGATTGAGTCTGAAGAAAAAAAGGC
TCCGCGAGGGATTGAAAGTGAATGCTTCTCCGAATTTCTAAATGGTCCCC
CCCCAACCTGGGTATGATTTTTCTTATTAAAAN

Query= MSMg01no441_a24.g1 MSMg01no441_a24.g1 CHROMAT_FILE:
MSMg01no441_a24.g1 PHD_FILE: MSMg01no441_a24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:07:43 2005
         (506 letters)



>mm_chr7_117589809_117590714
          Length = 906

 Score =  789 bits (408), Expect = 0.0
 Identities = 423/428 (98%), Gaps = 1/428 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttggaactcgctttgtaaaccaggctggcctccagaactcaagagatcctcttgcctct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttggaactcgctttgtaaaccaggctggcctccagaactcaagagatcctcttgcctct 260

                                                                       
Query: 61  gcctccttagtgctgagattaaaggcagagttttattttcacaatatttggtatataata 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcctccttagtgctgagattaaaggcagagttttattttcacaatatttggtatataata 320

                                                                       
Query: 121 tctactgtataaatatactgaatgagaaacaaatactctttatataactatctactaaat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctactgtataaatatactgaatgagaaacaaatactctttatataactatctactaaat 380

                                                                       
Query: 181 gaaggatcctcctctaaagactatataagaatttgtttcaaacataggactctaaaaata 240
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaaggatcctcttctaaagactatataagaatttgtttcaaacataggactctaaaaata 440

                                                                       
Query: 241 attacactctaatggggtatagtggtacataactttaatcccaacacctggagggcagag 300
           ||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||
Sbjct: 441 attacactctaatggggtatagtggtacataactttaatcaaaacacctgaagggcagag 500

                                                                       
Query: 301 gcaggtgagaccaaagtcagcctggtctacacaatagtgccaaacctacacagagacagc 360
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcaggtgagaccaa-gtcagcctggtctacacaatagtgccaaacctacacagagacagc 559

                                                                       
Query: 361 acttctcaacataatgtgtgagtgtctatgtgtaaacatgtatacacagaaacacacaca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 acttctcaacataatgtgtgagtgtctatgtgtaaacatgtatacacagaaacacacaca 619

                   
Query: 421 cacacaca 428
           ||||||||
Sbjct: 620 cacacaca 627


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 506
Length of database: 906
Length adjustment: 10
Effective length of query: 496
Effective length of database: 896
Effective search space:   444416
Effective search space used:   444416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)