Query= MSMg01no441_n08.b1 MSMg01no441_n08.b1 CHROMAT_FILE:
MSMg01no441_n08.b1 PHD_FILE: MSMg01no441_n08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:08:46 2005
(401 letters)
>mm_chr7_121371221_121372021
Length = 801
Score = 745 bits (385), Expect = 0.0
Identities = 394/397 (99%)
Strand = Plus / Plus
Query: 5 gaattcaaataatgcttcctaaatcacctcaaaatgtttattttactttaaaacccagga 64
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaaataaagcttcctaaatcacctcaaaatgtttattttactttaaaacccagga 264
Query: 65 tcagcttcacacattttatcagctactgttctcttcagtgtcttttaaactagaccagtt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tcagcttcacacattttatcagctactgttctcttcagtgtcttttaaactagaccagtt 324
Query: 125 tcctgtttttgcctgttttgtttctttggtttttcaaaacagtttcactgtgtaaccctc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tcctgtttttgcctgttttgtttctttggtttttcaaaacagtttcactgtgtaaccctc 384
Query: 185 tggctgtccctgaactccccctatagatcaggcagcctagaacttaaagagatccatctg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tggctgtccctgaactccccctatagatcaggcagcctagaacttaaagagatccatctg 444
Query: 245 cctctggctcctgagggctgggataaaggatgtgacccaccacctcctggctttgctgtc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cctctggctcctgagggctgggataaaggatgtgacccaccacctcctggctttgctgtc 504
Query: 305 tgttttcaatcacacaagattttattttttttaagagacaagataaagaaatggctcagt 364
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tgtttttaatcacacaagattttattttttttaagagacaagataaagaaatggctcagt 564
Query: 365 ggttaagagcacttgctgttcttacacagaaccctgg 401
|||||||||||||||||||||| ||||||||||||||
Sbjct: 565 ggttaagagcacttgctgttctcacacagaaccctgg 601
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 401
Length of database: 801
Length adjustment: 9
Effective length of query: 392
Effective length of database: 792
Effective search space: 310464
Effective search space used: 310464
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no441_n08.g1 MSMg01no441_n08.g1 CHROMAT_FILE:
MSMg01no441_n08.g1 PHD_FILE: MSMg01no441_n08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:08:46 2005
(200 letters)
>mm_chr7_121497496_121498095
Length = 600
Score = 360 bits (186), Expect = e-104
Identities = 195/198 (98%), Gaps = 2/198 (1%)
Strand = Plus / Minus
Query: 1 tgtcagctgccttttttttctct-ttcactttttgctcagcagagtcccagaccatggag 59
||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 397 tgtcaactgccttttttttct-tattcactttttgctcagcagagtcccagaccatggag 339
Query: 60 tggtacagcttatattcaagctaggtctccatatccttagtcaatcctcacaaagcccct 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 tggtacagcttatattcaagctaggtctccatatccttagtcaatcctcacaaagcccct 279
Query: 120 cacatacactcaaagctgtaccttataaatatcctacaagacttgcttttcttttgtggg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 cacatacactcaaagctgtaccttataaatatcctacaagacttgcttttcttttgtggg 219
Query: 180 gtggtggtagtggtggtg 197
||||||||||||||||||
Sbjct: 218 gtggtggtagtggtggtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 200
Length of database: 600
Length adjustment: 8
Effective length of query: 192
Effective length of database: 592
Effective search space: 113664
Effective search space used: 113664
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
