Query= MSMg01no441_p22.b1 MSMg01no441_p22.b1 CHROMAT_FILE:
MSMg01no441_p22.b1 PHD_FILE: MSMg01no441_p22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:08:58 2005
(393 letters)
>mm_chr7_71307253_71308045
Length = 793
Score = 694 bits (359), Expect = 0.0
Identities = 382/393 (97%), Gaps = 6/393 (1%)
Strand = Plus / Plus
Query: 1 ctgtaggtcattggcccaatgtgagtaactgatattgttctcaggtcccctacgaggaag 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 207 ctgtaggtcattggcccaatgtgagtaactgatattgttttcaggtcccctacgaggaag 266
Query: 61 gggactctccagtttaccacctgtgtttctctagggcagtggttctcgacattcctaacg 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 gggactctcgagtttaccacctgtgtttctctagggcagtggttctcgacattcctaacg 326
Query: 121 ctgcagctgtttaatacagtccctcgtgttgtggtgacccccaaacattataaaattatt 180
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 327 ctgcagctgtttaatacaatccctcgtgttgtggtgacccccaaacattataaaat---- 382
Query: 181 ttcattgttatttcataactgtaattttgctactgttttaaatttgtaacgtaaatattt 240
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 383 --cattgttatttcataactgtaattttgctactgttttgaatttgtaacgtaaatattt 440
Query: 241 ttggagacagaagtttgccaaattgattgcgacccacaggttttgaaccactgctatagg 300
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 441 ttggagacagaagtttgccaaattgattgcaacccacaggttttgaaccactgctatagg 500
Query: 301 gtctattagatcctgagccttctgaaacaaatgtgctttttactattagttgtcatggtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtctattagatcctgagccttctgaaacaaatgtgctttttactattagttgtcatggtt 560
Query: 361 actagcaaaaggagcattgctagctggaagtac 393
|||||||||||||||||||||||||||||||||
Sbjct: 561 actagcaaaaggagcattgctagctggaagtac 593
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 393
Length of database: 793
Length adjustment: 9
Effective length of query: 384
Effective length of database: 784
Effective search space: 301056
Effective search space used: 301056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no441_p22.g1 MSMg01no441_p22.g1 CHROMAT_FILE:
MSMg01no441_p22.g1 PHD_FILE: MSMg01no441_p22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:08:59 2005
(421 letters)
>mm_chr7_71515547_71516370
Length = 824
Score = 642 bits (332), Expect = 0.0
Identities = 387/410 (94%), Gaps = 15/410 (3%)
Strand = Plus / Minus
Query: 26 agagtaagtttcaggacagctagggctacacag-ggaaaccctgtcttg---aaaac--a 79
|||||||||||||||||||| |||||||||||| || |||||| ||||| ||||| |
Sbjct: 718 agagtaagtttcaggacagccagggctacacagagg-aaccctctcttgaaaaaaacaaa 660
Query: 80 aac--aaacaaac---aaacaaacaaaccaaaacaccaagattcactttcagtggac-ta 133
||| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 659 aacaaaaacaaacaaaaaacaaacaaaccaaaacaccaagattcactttcagtggactta 600
Query: 134 tggaaatgttggtgtggtatcctgattagtatctgctaaatagcaactacttttt--aaa 191
||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 599 tgggaatgttggtgtggtatcctgattagtatctgctaaatagcaactactttttaaaaa 540
Query: 192 aaaaagatctaagtgctgttaacttaggacagtgggttatcatgtgatttaaggctctcg 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 aaaaagatctaagtgctgttaacttaggacagtgggttatcatgtgatttaaggctctcg 480
Query: 252 ggtggttgggtgatagctgaaagggccatgaagggtggactgccattgctttcctggtgt 311
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 ggtgcttgggtgatagctgaaagggccatgaagggtggactgccattgctttcctggtgt 420
Query: 312 aagttcagtcacctggagatgggatgtgcctcaggagaggccattcctcttgagccccca 371
|||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 419 aagttcagtcacgtggagatgggatgggcctcagaagaggccattcctcttgagccccca 360
Query: 372 ccttccagcgagcacttgattgaatcttactcaaactcctcatctctgac 421
||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 359 ccttccagcgagcgcttgattgaatcttactcaaactcctcatctctgac 310
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 421
Length of database: 824
Length adjustment: 9
Effective length of query: 412
Effective length of database: 815
Effective search space: 335780
Effective search space used: 335780
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
