Query= MSMg01no444_a08.b1 MSMg01no444_a08.b1 CHROMAT_FILE:
MSMg01no444_a08.b1 PHD_FILE: MSMg01no444_a08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:11:48 2005
(318 letters)
>mm_chr7_77038847_77039570
Length = 724
Score = 557 bits (288), Expect = e-163
Identities = 313/324 (96%), Gaps = 6/324 (1%)
Strand = Plus / Plus
Query: 1 gacgagaactgaagaaggaacataatcagagttctgcacgtgaaccttccagaaaaacag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gacgagaactgaagaaggaacataatcagagttctgcacgtgaaccttccagaaaaacag 260
Query: 61 tacattcatggtcaaggatagaggtctaggaaaacttgtagaccctcttttatttaaaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tacattcatggtcaaggatagaggtctaggaaaacttgtagaccctcttttatttaaaac 320
Query: 121 ttaaaaacaaacaaacaaa--aaaaaactccctaggtttacaaaactctgagatttcaag 178
||||||||||||||||||| |||||||||||| |||||||||||||| |||||||||||
Sbjct: 321 ttaaaaacaaacaaacaaacaaaaaaactccctgggtttacaaaactccgagatttcaag 380
Query: 179 caaaaattaaccctgagatgggagtaaaaaaagacagaagagaaaagaggaaaatgaatg 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caaaaattaaccctgagatgggagtaaaaaaagacagaagagaaaagaggaaaatgaatg 440
Query: 239 ----gtggcagcagttactctacttacaattctcagcgttgagaacatggggatggaatc 294
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aatggtggcagcagttacacaacttacaattctcagcgttgagaacatggggatggaatc 500
Query: 295 caatgatgctttacaagagagaca 318
||||||||||||| ||||||||||
Sbjct: 501 caatgatgctttataagagagaca 524
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 724
Length adjustment: 9
Effective length of query: 309
Effective length of database: 715
Effective search space: 220935
Effective search space used: 220935
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no444_a08.g1 MSMg01no444_a08.g1 CHROMAT_FILE:
MSMg01no444_a08.g1 PHD_FILE: MSMg01no444_a08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:11:48 2005
(484 letters)
>mm_chr7_77212377_77213260
Length = 884
Score = 899 bits (465), Expect = 0.0
Identities = 471/473 (99%), Gaps = 1/473 (0%)
Strand = Plus / Minus
Query: 9 ggaattcctggggcttgagaaaaaaccgagagcgtatggactccccgctcacacacacat 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ggaattcctggggcttgagaaaaaaccgagagcgtatggactccccgctcacacacacat 622
Query: 69 acacacttgccacggaacgccccctcccctcttttgttataagaaaagcaagaacagaaa 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 acacacttgccacggaacgccccctcccctcttttgttataagaaaagcaagaacagaaa 562
Query: 129 gtgacctcctgagccaaaggttctgacactgaatcaaatccctttaggtctgaactgaca 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtgacctcctgagccaaaggttctgacactgaatcaaatccctttaggtctgaactgaca 502
Query: 189 ggctgggcctggctttagattacgttatcacatcttggaaggaggctggcatgttcctct 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggctgggcctggctttagattacgttatcacatcttggaaggaggctggcatgttcctct 442
Query: 249 gggttccctgtgtgtgaagagctggcgttttacccttgctgcctattaagtcaagatctg 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gggttccctgtgtgtgaagagctggcgttttacccttgctgcctattaagtcaagatctg 382
Query: 309 atgtcttgtcgagaatgaaaccacatcacacagtgagggctgggataaagggcagagaga 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgtcttgtcgagaatgaaaccacatcacacagtgagggctgggataaagggcagagaga 322
Query: 369 aaacgcagccgtggaaataaaatgcagagcccaagaggaactcatttgcgttgtttacca 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaacgcagccgtggaaataaaatgcagagcccaagaggaactcatttgcgttgtttacca 262
Query: 429 ggctggccacaagaagattaaaaaatattagaaaacgtttttttttggggggg 481
|||||||||| |||||||||||||||||||||||||||||||||| |||||||
Sbjct: 261 ggctggccacgagaagattaaaaaatattagaaaacgtttttttt-ggggggg 210
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 484
Length of database: 884
Length adjustment: 10
Effective length of query: 474
Effective length of database: 874
Effective search space: 414276
Effective search space used: 414276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
