Query= MSMg01no446_j10.b1 MSMg01no446_j10.b1 CHROMAT_FILE:
MSMg01no446_j10.b1 PHD_FILE: MSMg01no446_j10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:15:10 2005
(243 letters)
>mm_chr7_121331833_121332475
Length = 643
Score = 447 bits (231), Expect = e-130
Identities = 240/243 (98%)
Strand = Plus / Minus
Query: 1 acttccggcagagactattgactacagacagtagatgccaccctaaggtctctcctctcc 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 443 acttccggcagagactattgactacagacagtagatgccaccctaaggtttctcctctcc 384
Query: 61 attttcagcatgctcctgtttttatgccacctgcaagggacaggaagctctaatttgact 120
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 attttcagcatgctcctgtctttatgccacctgcaagggacaggaagctctaatttgact 324
Query: 121 ctgagttagccactatgcgacacacctgagtgtctaccagtgtggcgtgtgtgcactctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ctgagttagccactatgcgacacacctgagtgtctaccagtgtggcgtgtgtgcactctg 264
Query: 181 tttttttcttgtgacagtctcttctccagctcctaccctattcctgctgccactaccttc 240
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tttttttcttgtgacattctcttctccagctcctaccctattcctgctgccactaccttc 204
Query: 241 cta 243
|||
Sbjct: 203 cta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 643
Length adjustment: 9
Effective length of query: 234
Effective length of database: 634
Effective search space: 148356
Effective search space used: 148356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no446_j10.g1 MSMg01no446_j10.g1 CHROMAT_FILE:
MSMg01no446_j10.g1 PHD_FILE: MSMg01no446_j10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:15:10 2005
(288 letters)
>mm_chr7_121152330_121153019
Length = 690
Score = 534 bits (276), Expect = e-156
Identities = 286/290 (98%), Gaps = 2/290 (0%)
Strand = Plus / Plus
Query: 1 aaagccagtctcctctacagagtgagttccaggatagcctgaagactaccaggctacaca 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 201 aaagccagtctcctctacagagtgagttccaggatagcctggagactaccaggctacaca 260
Query: 61 gagaaaccatgtctcaaaaaagacaacaacaataacaacaaaaagagtctataactccac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagaaaccatgtctcaaaaaagacaacaacaataacaacaaaaagagtctataactccac 320
Query: 121 ctccatgaaatctggcatcttcttctggcttttatgagctgcattcatacacacacacac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctccatgaaatctggcatcttcttctggcttttatgagctgcattcatacacacacacac 380
Query: 181 ac--ttaatattaaatattatcttcagccaggcagtggtggtgcatgcctttaatcccag 238
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acacttaatattaaatattatcttcagccaggcagtggtggtgcatgcctttaatcccag 440
Query: 239 tacttgggaggcataggcaggtggatctctgagttcaaggacagcctggt 288
||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 441 tacttgggaggcagaggcaggtggatctctgagttcaaggacagcctggt 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 690
Length adjustment: 9
Effective length of query: 279
Effective length of database: 681
Effective search space: 189999
Effective search space used: 189999
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
