Query= MSMg01no446_k22.b1 MSMg01no446_k22.b1 CHROMAT_FILE:
MSMg01no446_k22.b1 PHD_FILE: MSMg01no446_k22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:15:17 2005
(507 letters)
>mm_chr7_47957207_47958113
Length = 907
Score = 897 bits (464), Expect = 0.0
Identities = 494/504 (98%), Gaps = 2/504 (0%)
Strand = Plus / Plus
Query: 5 gaattcagctcctctgccagagcacagtgatttctcatccaataagccatcgctccatcc 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagctcctctgcaagagcacagtgatttctcatccaataagccatcgctccatcc 264
Query: 65 ctggctctgagttccttacatccaatttgtctggagttaggacagacaagtgttactgtc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctggctctgagttccttacatccaatttgtctggagttaggacagacaagtgttactgtc 324
Query: 125 tcgacatcacagatgtgtgccacttgatctcagctgtaccaactagtctcctcagtggcc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tcgacatcacagatgtgtgccacttgatctcagctgtaccaactagtctcctcagtggcc 384
Query: 185 tcaggactctcctatcagtgcttacagtattattactactcctcgacttcactttgctgt 244
|||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||
Sbjct: 385 tcaggactctcctatcagcgcttacagtattattactactcctcaacttcactttgctgt 444
Query: 245 ctcataaggtcactgagatctggcaccttccatcctgaagaggaagcagccaaattcatg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctcataaggtcactgagatctggcaccttccatcctgaagaggaagcagccaaattcatg 504
Query: 305 tcagtgaaaacacatccaggcagctgtgttttactcgccaagcacagaaataggttctgc 364
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tcagtgaaaacacatccaagcagctgtgttttactcgccaagcacagaaataggttctgc 564
Query: 365 ccacagaagagctgaggcagtgagtggggcccattgccaagtccttaatgtcaatctggt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ccacagaagagctgaggcagtgagtggggcccattgccaagtccttaatgtcaatctggt 624
Query: 425 catggcgaatgctatgacctagtaatgtgccacatt-actatgttgtatacatagaagcc 483
||||| || |||||||||||||||||||||||||| | ||||| |||||||||||||||
Sbjct: 625 catggtgagtgctatgacctagtaatgtgccacatagaatatgt-gtatacatagaagcc 683
Query: 484 ttcctacagagaagcattccaagc 507
||||||||||||||||||||||||
Sbjct: 684 ttcctacagagaagcattccaagc 707
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 507
Length of database: 907
Length adjustment: 10
Effective length of query: 497
Effective length of database: 897
Effective search space: 445809
Effective search space used: 445809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no446_k22.g1 MSMg01no446_k22.g1 CHROMAT_FILE:
MSMg01no446_k22.g1 PHD_FILE: MSMg01no446_k22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:15:17 2005
(279 letters)
>mm_chr7_48134227_48134905
Length = 679
Score = 526 bits (272), Expect = e-154
Identities = 275/276 (99%)
Strand = Plus / Minus
Query: 1 agagtcattcatgccacaaagctgcacaaggacaactgggaatgcccactgtaactgggg 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 agagtcattcatgccacgaagctgcacaaggacaactgggaatgcccactgtaactgggg 417
Query: 61 gcctggctgaatctggtcactgcataaactcaggagaggagtgtcccttctcctgggctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 gcctggctgaatctggtcactgcataaactcaggagaggagtgtcccttctcctgggctc 357
Query: 121 ctaatctgggtggcctcgtgctgtctcttctgtcagttctgctcagagaaatctgcaaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 ctaatctgggtggcctcgtgctgtctcttctgtcagttctgctcagagaaatctgcaaac 297
Query: 181 gccatgccaggcagacttcggaggaaatgagcgcagacagcagatacttagtcctgctta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 gccatgccaggcagacttcggaggaaatgagcgcagacagcagatacttagtcctgctta 237
Query: 241 gaaggtcatacagttctagctggcaggcttgcctta 276
||||||||||||||||||||||||||||||||||||
Sbjct: 236 gaaggtcatacagttctagctggcaggcttgcctta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 279
Length of database: 679
Length adjustment: 9
Effective length of query: 270
Effective length of database: 670
Effective search space: 180900
Effective search space used: 180900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
