Query= MSMg01no446_l15.b1 MSMg01no446_l15.b1 CHROMAT_FILE:
MSMg01no446_l15.b1 PHD_FILE: MSMg01no446_l15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:15:20 2005
(246 letters)
>mm_chr7_75437610_75438255
Length = 646
Score = 429 bits (222), Expect = e-125
Identities = 240/246 (97%)
Strand = Plus / Plus
Query: 1 ctgaacccaggtcctgtggacatgcaggctcagtcatctctccggctccagcagggcatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgaacccaggtcctgtggacatgcaggctcagtcatctctccggctccagcagggcatc 260
Query: 61 ctttaatggtatctttcgaggctcaaggtgcgcacttgtgaatttatttatttattttta 120
|||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 261 ctttaatggtttctttcgaggctcaaggtgtgtacttgtgaatttatttatttattttta 320
Query: 121 aacctcattcactttacagatgcagccctatggactgtatggtgttgagccacaggcacc 180
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||
Sbjct: 321 aacctcattcactttacagacgcagccctatggactgtatggtgttgagccacaggcgcc 380
Query: 181 tctggtcaagccaggggtcctgatgaggtgacttttggattttgagacatttagatgttt 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctggtcaagccaggggtcctgatgaggtgacttttggattttgagacatttagatgttc 440
Query: 241 tgggga 246
||||||
Sbjct: 441 tgggga 446
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 646
Length adjustment: 9
Effective length of query: 237
Effective length of database: 637
Effective search space: 150969
Effective search space used: 150969
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no446_l15.g1 MSMg01no446_l15.g1 CHROMAT_FILE:
MSMg01no446_l15.g1 PHD_FILE: MSMg01no446_l15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:15:20 2005
(248 letters)
>mm_chr7_75624927_75625576
Length = 650
Score = 456 bits (236), Expect = e-133
Identities = 246/250 (98%), Gaps = 2/250 (0%)
Strand = Plus / Minus
Query: 1 gacccttctcagcttcaggaaacagagaaccccagggtaactaaagccttgcacagcaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 gacccttctcagcttcaggaaacagagaaccccagggtaactaaagccttgcacagcaca 391
Query: 61 cagcactaattgtgatgctcaaacagcttcagtcctcaaggtttatgtaaatccacatag 120
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 390 cagcactaattgtgatgctcaaacagcttcagttcttaaggtttatgtaaatccacatag 331
Query: 121 ccagcatgcaaagatctaattgccacttgaattac--tttttttttttaagcagatgcaa 178
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 330 ccagcatgcaaagatctaattgccacttgaattactttttttttttttaagcagatgcaa 271
Query: 179 gatccacaaaaatggctgggtaaagcagccacaattacaggacataattcaagactgcta 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 gatccacaaaaatggctgggtaaagcagccacaattacaggacataattcaagactgcta 211
Query: 239 gggcaaaagt 248
||||||||||
Sbjct: 210 gggcaaaagt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 650
Length adjustment: 9
Effective length of query: 239
Effective length of database: 641
Effective search space: 153199
Effective search space used: 153199
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
