NAAAATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCATGATTTGTAGCCACTGCTATGTGTCAAGCCCCTCTGAT
CTCCATTTCTGCTTCTACAAACATGCCCCAGACCTCTGAACTCCACCATC
AAATTCAGCATATGCACATATCACTCTAGCATGATATCTATGCTATGGGG
GATCCTTCACCCCTTTGGTAAGTTCTGGCCCTGTTCCTCTGTTCTAGTTA
GGATCAACCCTGGGATTTTGGCCTCATTTTCTTTGCCCTGTTAACCTTTT
TGCAGTCTTCAATCTCACCTCAAATGGACCTGTCCAGTTTTTAATTTGGT
TCTTCTCATAGATCAGAGTCTTTCCAGACATTAAGTCATTGCCCAAGGCC
TCACTGCCCACTGGGAGGTGTCTGGGTTTCCAGTGGTCTGTCCACCTGAA
TTTCTGAAGAAAATCTGCTTCTGCTTCTGCTTCTGCTTCCCCTGGACACG
TTTCCTCTTCCTCTTGGACTCTGCAGCCACAGTTTTAAGCGATGCCTCAG
TTTCTGTTCTGTTTACTCAGTCAGCCTATACCATGGAGGCTTTTTTGTTG
TCTCAGCCAAACTTCCTTTGTAACCCTTATCTTTGTTTGGGTTTGAGACA
TATACCTGAGGCTGGTCTGCCTCTGACTTTCAAGTGCTGGGATTGTAGTC
CACACTTCGCTTGGACTCTTCGTGGTTGCTCTGCCTCCTTGTTAGCAAGA
TTACAAC

NNCCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACTCTGTAGACCAGGCTGG
CTTTGAACTCACAAAGATCTACCTCTGTCTCTTGAGTGCTGGGATTAAAG
GCAGGCACTACTATGCCTAACCTCCTTATTTTTATTTTTATTTTTATTTA
CATTTTAAAAAATATTTATTTTGGGCTAGAAAAATAGATTATTGATTAAG
AGCAAGTCCTGCTCTTCCAGTGGATCTGATTTCCAACACCCTGATCGGAG
ACTCACAACAACCTGTAATTCCAGTTCCAGGGGAGCTGAGGACTCCTAGA
ACACTTGCATTCACAAGTACATACCCTCCCCCCCCCCACACACATACACA
CATATACACTCATACACATATACACATACACACATATACACACATAGACA
AATATGCATATATACACACACATATATACTCATACACATATACATATACA
CATATACACTCACACACATTCACACACATATATACACTGTATATTTACAC
ACACATACACACATATACACTCACACTATACACATATATACTCACACACA
TATAAACTTACATACATGGTCCGTACACCAATACTTTACCCAACACCCTA
TTTTCTCCCTATATTCATATACCTACGTATAACCCCCACCCCTTTTTGTT
CCCCCCCGCCATTATTTTTGGTCCCCCTTTACTTTTATCACGCGTAACTA
AAAAACTTCTCCCCCG

Query= MSMg01no447_a19.b1 MSMg01no447_a19.b1 CHROMAT_FILE:
MSMg01no447_a19.b1 PHD_FILE: MSMg01no447_a19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:15:45 2005
         (590 letters)



>mm_chr7_104399690_104400685
          Length = 996

 Score = 1089 bits (563), Expect = 0.0
 Identities = 583/593 (98%), Gaps = 6/593 (1%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcatgatttgtagccactgctatgtgtcaagcccctctgatctccatttctgctt 63
           ||||||||||||||| ||  |||||||||||||||||||||||| |||||||||||||||
Sbjct: 204 ggaattcatgatttggaggtactgctatgtgtcaagcccctctggtctccatttctgctt 263

                                                                       
Query: 64  ctacaaacatgccccagacctctgaactccaccatcaaattcagcatatgcacatatcac 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctacaaacatgccccagacctctgaactccaccatcaaattcagcatatgcacatatcac 323

                                                                       
Query: 124 tctagcatgatatctatgctatgggggatccttcacccctttggtaagttctggccctgt 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tctagcatgatatctatgctatgggggatccttcacccctttggtaagttctggccctgt 383

                                                                       
Query: 184 tcctctgttctagttaggatcaaccctgggattttggcctcattttctttgccctgttaa 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tcctctgttctagttaggatcaaccctgggattttggcctcattttctttgccctgttaa 443

                                                                       
Query: 244 cctttttgcagtcttcaatctcacctcaaatggacctgtccagtttttaatttggttctt 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 cctttttgcagtcttcaatctcacctcaaatggacctgtccagtttttaatttggttctt 503

                                                                       
Query: 304 ctcatagatcagagtctttccagacattaagtcattgcccaaggcctcactgcccactgg 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ctcatagatcagagtctttccagacattaagtcattgcccaaggcctcactgcccactgg 563

                                                                       
Query: 364 gaggtgtctgggtttccagtggtctgtccacctgaatttctgaagaaaatctgcttctgc 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gaggtgtctgggtttccagtggtctgtccacctgaatttctgaagaaaatctgcttctgc 623

                                                                       
Query: 424 ttctgcttctgcttc------ccctggacacgtttcctcttcctcttggactctgcagcc 477
           |||||||||||||||      |||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ttctgcttctgcttctgcttcccctggacacgtttcctcttcctcttggactctgcagcc 683

                                                                       
Query: 478 acagttttaagcgatgcctcagtttctgttctgtttactcagtcagcctataccatggag 537
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 acagttttaagcgatgcctcagtttctgttctgtttactcagtcagcctataccatggag 743

                                                                
Query: 538 gcttttttgttgtctcagccaaacttcctttgtaacccttatctttgtttggg 590
           |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 gcttttttgttgtctcagccaaacttcctttgtaacccttatctttgtttggg 796


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 590
Length of database: 996
Length adjustment: 10
Effective length of query: 580
Effective length of database: 986
Effective search space:   571880
Effective search space used:   571880
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)