Query= MSMg01no447_h05.b1 MSMg01no447_h05.b1 CHROMAT_FILE:
MSMg01no447_h05.b1 PHD_FILE: MSMg01no447_h05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:16:21 2005
(463 letters)
>mm_chr7_125783209_125784071
Length = 863
Score = 777 bits (402), Expect = 0.0
Identities = 449/468 (95%), Gaps = 8/468 (1%)
Strand = Plus / Plus
Query: 1 tattttctcctattgttttccacagaaaaatagttgacaaagaaaaaaacaaacagtcgc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 201 tattttctcctattgttttccacagaaaaatagttgacaaagaaaaaaacaaacagtcac 260
Query: 61 atggcatcctcgaggccaactgctgtgctcagtgtctgggctccctttcactggtgagtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atggcatcctcgaggccaactgctgtgctcagtgtctgggctccctttcactggtgagtc 320
Query: 121 aacttttaaagaaacttttgttcccatgcctttgatctcagtactgaggaggcagaggca 180
|||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 321 aacttttaaagacacttttgttcccatgcctttgatctcagtactggggaggcagaggca 380
Query: 181 gatagggctctgtgagccagaggccagagctcctcttcataatgagttccaggttatcca 240
|||||||||||||||||||||||| |||| |||||||||| |||||||||||||||||
Sbjct: 381 gatagggctctgtgagccagaggctagagttcctcttcat---gagttccaggttatcca 437
Query: 241 gggctacatagtgagacttggttcccaaccgaggtttccactaacatagaatttgcatgt 300
||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||
Sbjct: 438 gggctacatagtgagacttggttcccagccgaggtttccattaacatagaatttgcatgt 497
Query: 301 tactgctctaacacatgctacatgaacacctgtgtacagcccgtgtgcatgatcaagttt 360
||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||| |
Sbjct: 498 tactgctgtaacacatgctacatgaacacctgtgtacagcctgtgtggatgatcaagtct 557
Query: 361 ga----ttaattagaattatcctctccttgtccttctgttatgccaacaaacttgtttcc 416
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 gactaattaattagaattatcctctccttgtccttctgttatgccaacaaacttgtttcc 617
Query: 417 tgcagacaaggaaccaat-agcttggtgaaccagtcatgttaactacg 463
|||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 618 tgcagacaaggaaccaattagcttggtgaaccagtcatgttaactacg 665
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 463
Length of database: 863
Length adjustment: 10
Effective length of query: 453
Effective length of database: 853
Effective search space: 386409
Effective search space used: 386409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no447_h05.g1 MSMg01no447_h05.g1 CHROMAT_FILE:
MSMg01no447_h05.g1 PHD_FILE: MSMg01no447_h05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:16:21 2005
(350 letters)
>mm_chr7_125969242_125969991
Length = 750
Score = 669 bits (346), Expect = 0.0
Identities = 346/346 (100%)
Strand = Plus / Minus
Query: 5 aggaagggctccgacggccgcagcttcccatcgatgcttatcgtctttgggacttcggga 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 aggaagggctccgacggccgcagcttcccatcgatgcttatcgtctttgggacttcggga 491
Query: 65 acgaggccgatggcggctttgaagaaagcatcagctgcaagacaagagtagggataagcg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 acgaggccgatggcggctttgaagaaagcatcagctgcaagacaagagtagggataagcg 431
Query: 125 ttgcaaaaagttcaaggctagagccttccttagcctactggggatcagacaacctgaggg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 ttgcaaaaagttcaaggctagagccttccttagcctactggggatcagacaacctgaggg 371
Query: 185 ttcagtttagtcaggaagcccagcagaaggttctgcaaaccaccatggataaggagctgc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 ttcagtttagtcaggaagcccagcagaaggttctgcaaaccaccatggataaggagctgc 311
Query: 245 tattgactagagcaaccaggaaacactagatgctaaccaggctcagactgaagaactaaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 tattgactagagcaaccaggaaacactagatgctaaccaggctcagactgaagaactaaa 251
Query: 305 acagagggggggccttttatggtcagtctgaagaaatggactgagg 350
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 acagagggggggccttttatggtcagtctgaagaaatggactgagg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 350
Length of database: 750
Length adjustment: 9
Effective length of query: 341
Effective length of database: 741
Effective search space: 252681
Effective search space used: 252681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
