Query= MSMg01no447_l20.b1 MSMg01no447_l20.b1 CHROMAT_FILE:
MSMg01no447_l20.b1 PHD_FILE: MSMg01no447_l20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:16:44 2005
(525 letters)
>mm_chr7_36684339_36685264
Length = 926
Score = 953 bits (493), Expect = 0.0
Identities = 518/529 (97%), Gaps = 7/529 (1%)
Strand = Plus / Plus
Query: 4 ggaattcactatgtatactaggctggctcccaaaacaaaataatttatttttattttgag 63
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcactatgtagactaggctggctcccaaaacaaaataatttatttttattttgag 263
Query: 64 tgtaggagtgtttggctgtatgtatataagtgcaccacaagtctgcagtgcttgtaggaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tgtaggagtgtttggctgtatgtatataagtgcaccacaagtctgcagtgcttgtaggaa 323
Query: 124 ccagaagggggcatccgatcacctcaaacttcgttataagctgtgacctaccatgtgggt 183
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 324 ccagaagggggcatccgatcacctgaaacttcgttataagctgtgacctaccatgtgggt 383
Query: 184 gctgggaactgaatccaagtcccctgtagccactgagcttatctgctgggctatttctct 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gctgggaactgaatccaagtcccctgtagccactgagcttatctgctgggctatttctct 443
Query: 244 agcttctgtacttgggtttttttt-ccgtgctataaaacagttatgaaaaataa-tctta 301
|||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||
Sbjct: 444 agcttctgtacttgggtttttttttccgtgctataaaacagttatgaaaaaaaaatctta 503
Query: 302 gaagttcgcaacatttctacactattgtttatacccaatgtcacactttctatttcccta 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gaagttcgcaacatttctacactattgtttatacccaatgtcacactttctatttcccta 563
Query: 362 tcccacgaatatatatggaatacaagttcccttctgttgttggaccttggctcgcttctg 421
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 564 tcccacgaatatatatggaatacaagttcccttctgttgttggaccctggctcgcttctg 623
Query: 422 ggaggaaagaacacagtgtagccaatccccatgtatatcactgattggttcctttggaaa 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ggaggaaagaacacagtgtagccaatccccatgtatatcactgattggttcctttggaaa 683
Query: 482 caaaatatctgaatcccgagttttttttt-----ctttttaaagacagg 525
||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 684 caaaatatctgaatcccgagttttttttttttttctttttaaagacagg 732
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 525
Length of database: 926
Length adjustment: 10
Effective length of query: 515
Effective length of database: 916
Effective search space: 471740
Effective search space used: 471740
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no447_l20.g1 MSMg01no447_l20.g1 CHROMAT_FILE:
MSMg01no447_l20.g1 PHD_FILE: MSMg01no447_l20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:16:44 2005
(449 letters)
>mm_chr7_36871170_36872018
Length = 849
Score = 837 bits (433), Expect = 0.0
Identities = 445/449 (99%)
Strand = Plus / Minus
Query: 1 tttcccagatgcctggatgttggggccttggacagcctgagtcccatttcttggttctgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 tttcccagatgcctggatgttggggccttggacagcctgagtcccatttcttggttctgg 590
Query: 61 ctagtgttactgccttctgaagacacttcaccaatgacatgactcttggaaacagctgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 ctagtgttactgccttctgaagacacttcaccaatgacatgactcttggaaacagctgat 530
Query: 121 cgcacccctaccatcggttctgaggcctttatgataaaccagttccaaatagcatgatgc 180
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 cgaacccctaccatcggttctgaggcctttatgataaaccagttccaaatagcatgatgc 470
Query: 181 tccaggcttgcctgcacacctgtcccctatggaaatcaataaatatcccatcgttagtct 240
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 469 tccaggcttgcctgcacacctgtcccctatggacatcaataaatatcccatcgttagtct 410
Query: 241 gaccagacctcaccacttaagaaagctgctgcccactgccaatcaagttaggacctttaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 gaccagacctcaccacttaagaaagctgctgcccactgccaatcaagttaggacctttaa 350
Query: 301 catctaaaatcatttctacagagcagagatgggtatttgccccttccttgatttctttcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 catctaaaatcatttctacagagcagagatgggtatttgccccttccttgatttctttcc 290
Query: 361 atcacgtttgattctccccacaccacacaatagggagggtggctaagatggtatttgaaa 420
|||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||
Sbjct: 289 atcacgtttgattctccccacaccacacaatagggatggtggctaagatggtgtttgaaa 230
Query: 421 tacacaacaaatcctaccaatgtctagtg 449
|||||||||||||||||||||||||||||
Sbjct: 229 tacacaacaaatcctaccaatgtctagtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 449
Length of database: 849
Length adjustment: 10
Effective length of query: 439
Effective length of database: 839
Effective search space: 368321
Effective search space used: 368321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
