Query= MSMg01no447_p02.b1 MSMg01no447_p02.b1 CHROMAT_FILE:
MSMg01no447_p02.b1 PHD_FILE: MSMg01no447_p02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:17:01 2005
(551 letters)
>mm_chr7_117630768_117631717
Length = 950
Score = 994 bits (514), Expect = 0.0
Identities = 541/552 (98%), Gaps = 8/552 (1%)
Strand = Plus / Minus
Query: 4 ggaattcttggcc---tttccgtctcctttttatttggatgttggttcatatataataat 60
||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 912 ggaattcttggccaca--tcagtctcctttttatttggatgttggttcatatataataat 855
Query: 61 aaattgctggcattactcaaacattcaaatatcctttaccacatttatctggtgttaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 854 aaattgctggcattactcaaacattcaaatatcctttaccacatttatctggtgttaagt 795
Query: 121 ttttggctcattagtttattacatgagctctttattccttttctttccctctctcctctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 ttttggctcattagtttattacatgagctctttattccttttctttccctctctcctctc 735
Query: 181 tttcctgctccctctttccc-ttttttgcacaatcccttatacacagatacattttcttt 239
|||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||
Sbjct: 734 tttcctgctccctctttccctttttttgcacaatcccttatacacatatacattttcttt 675
Query: 240 ctctgtctctttctctatctccctccctccctccttccttccctacactaatctccctaa 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 ctctgtctctttctctatctccctccctccctccttccttccctacactaatctccctaa 615
Query: 300 tacccccctccaaatcatttgacagaaaaatcccatatttatatacctttcctctgtatt 359
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 614 tacccccctccaaatcatttgacag-aaaatcccatatttatatacctttcctctgtatt 556
Query: 360 ttttggttcctaggctggacctgatgcactgggctgaagtgactctcttctgcactttaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 555 ttttggttcctaggctggacctgatgcactgggctgaagtgactctcttctgccctttaa 496
Query: 420 actggacattactataattatattaataatattcttcactacccattccatagtcccaac 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 actggacattactataattatattaataatattcttcactacccattccatagtcccaac 436
Query: 480 ccagtacataactgcatttattatgtttgttttttattttctcttttcatcttgaacttt 539
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 435 ccagtacataactgcatttattatgtttgtttttta-tttctcttttcatcttgaacttt 377
Query: 540 ttctttgtcttt 551
||||||||||||
Sbjct: 376 ttctttgtcttt 365
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 551
Length of database: 950
Length adjustment: 10
Effective length of query: 541
Effective length of database: 940
Effective search space: 508540
Effective search space used: 508540
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no447_p02.g1 MSMg01no447_p02.g1 CHROMAT_FILE:
MSMg01no447_p02.g1 PHD_FILE: MSMg01no447_p02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:17:01 2005
(411 letters)
>mm_chr7_117476206_117477016
Length = 811
Score = 750 bits (388), Expect = 0.0
Identities = 407/416 (97%), Gaps = 5/416 (1%)
Strand = Plus / Plus
Query: 1 acagcagctgtgcttaccgacatgagctttggccatgactgaacctatcaacctattatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 acagcagctgtgcttaccgacatgagctttggccatgactgaacctatcaacctattatc 255
Query: 61 ccagagggaggaagatctcatgaggccccaccctca-----gagctgtaggtgtgccggg 115
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 256 ccagagggaggaagatctcatgaggccccaccctcacgcaagagctgtaggtgtgccggg 315
Query: 116 ggaggaagagacattttcctcagtggagtgagttaggttcccatggccgtgtaaataagc 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 ggaggaagagacattttcctcagtggagtgagttaggttcccatggccgtgtaaataagc 375
Query: 176 ccttaccgtgcaaccgtaatgaaattcactggattaccaaaggcaaaaccacaaccacga 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 ccttaccgtgcaaccgtaatgaaattcactggattaccaaaggcaaaaccacaaccacga 435
Query: 236 caatagaagggggttcacagaagggaagaaggaaggaatcagcagagtaggagagaaaca 295
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 436 caatagaagggggttcacagaagggaagaaggaaggaatcagcagggtaggagagaaaca 495
Query: 296 atgagagtaacaaagtgtggatataataaaaatataccatatttacaatgggtgtcatat 355
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 496 atgagagtaacaaagtgtggatataataaaaatataccatatttacaatgaatgtcatat 555
Query: 356 taggggtattaagtgctaataaacaaaaacctaaggtattaaatgaaatctaatac 411
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 556 taggggtattaagtgctaataaacaaaaacctaaggtattaaatgaaatataatac 611
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 411
Length of database: 811
Length adjustment: 9
Effective length of query: 402
Effective length of database: 802
Effective search space: 322404
Effective search space used: 322404
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
