Query= MSMg01no448_a24.b1 MSMg01no448_a24.b1 CHROMAT_FILE:
MSMg01no448_a24.b1 PHD_FILE: MSMg01no448_a24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:17:11 2005
(453 letters)
>mm_chr7_106290553_106291405
Length = 853
Score = 847 bits (438), Expect = 0.0
Identities = 450/454 (99%), Gaps = 2/454 (0%)
Strand = Plus / Minus
Query: 1 tggcgttgaacacagagatctacctgcctctgcctccaagtgctgggattaaaggcatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 810 tggcgttgaacacagagatctacctgcctctgcctccaagtgctgggattaaaggcatgt 751
Query: 61 gccatcatgcccagatacacataattcttaaatagtgctagggattgaacccaaggcctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 gccatcatgcccagatacacataattcttaaatagtgctagggattgaacccaaggcctt 691
Query: 121 gtgaatattcggcatctactcaaccattgagctatatatacatcttcccactcagtaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 gtgaatattcggcatctactcaaccattgagctatatatacatcttcccactcagtaaaa 631
Query: 181 gattttaaatccatctattatatgttggagtcttcatgggcacagatactggcccaccta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 gattttaaatccatctattatatgttggagtcttcatgggcacagatactggcccaccta 571
Query: 241 cc-gccccctacaatgacaccagtactattcagcgcatggacagacagtggggagctgac 299
|| |||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 ccacccccct-cagtgacaccagtactattcagcgcatggacagacagtggggagctgac 512
Query: 300 ctgctcagtgacaaagctagaaggtggcagtcagaatcccaaactgcctgcttcctgttg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 ctgctcagtgacaaagctagaaggtggcagtcagaatcccaaactgcctgcttcctgttg 452
Query: 360 tgtctgcctctctgaacactgtgttctttcagctataacagtccaggtggtggagaaatt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 tgtctgcctctctgaacactgtgttctttcagctataacagtccaggtggtggagaaatt 392
Query: 420 cacactctatggggacgggggaatcaatattctg 453
||||||||||||||||||||||||||||||||||
Sbjct: 391 cacactctatggggacgggggaatcaatattctg 358
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 453
Length of database: 853
Length adjustment: 10
Effective length of query: 443
Effective length of database: 843
Effective search space: 373449
Effective search space used: 373449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no448_a24.g1 MSMg01no448_a24.g1 CHROMAT_FILE:
MSMg01no448_a24.g1 PHD_FILE: MSMg01no448_a24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:17:11 2005
(442 letters)
>mm_chr7_106116294_106117135
Length = 842
Score = 818 bits (423), Expect = 0.0
Identities = 435/439 (99%)
Strand = Plus / Plus
Query: 4 aacttctaccctgatttgaatatattgcaaaccagagagcaggagttcaggctggggcca 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 aacttctaccctgatttgaatatattgcaaaccagagagcaggagttcaggctggggcca 263
Query: 64 cgtgtcatcgtcatctggttttccttcttgtcccactgtcccattacattactgattttt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cgtgtcatcgtcatctggttttccttcttgtcccactgtcccattacattactgattttt 323
Query: 124 aatttagttggatgcagaaaactgagatgacaaaacactggagaagacttcctcatgcag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aatttagttggatgcagaaaactgagatgacaaaacactggagaagacttcctcatgcag 383
Query: 184 ataataacgtcagcgctgctgaagctcacttcattaaagcgacacacacaatatccttcc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ataataacgtcagcgctgctgaagctcacttcattaaagcgacacacacaatatccttcc 443
Query: 244 ttgtgtcagaatgaaacggccgcgccatccttctgactcattctccacatttccctctca 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aagtgtcagaatgaaacggccgcgccatccttctgactcattctccacatttccctctca 503
Query: 304 gcgcaacgccagagctgcacaaggtgttcatttcctgtctcacccagcaaccaccttctg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gcgcaacgccagagctgcacaaggtgttcatttcctgtctcacccagcaaccaccttctg 563
Query: 364 catttttattgtgttgatctctcctgcctgcaattccaaggggattcctcattttaaaac 423
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 564 catttttattgtgttgatctctcctgcctgcaattccacggggattcctcattttaaaac 623
Query: 424 cttccttgctctcactccc 442
|| ||||||||||||||||
Sbjct: 624 ctcccttgctctcactccc 642
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 442
Length of database: 842
Length adjustment: 9
Effective length of query: 433
Effective length of database: 833
Effective search space: 360689
Effective search space used: 360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
