Query= MSMg01no449_j24.b1 MSMg01no449_j24.b1 CHROMAT_FILE:
MSMg01no449_j24.b1 PHD_FILE: MSMg01no449_j24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:19:18 2005
(589 letters)
>mm_chr7_145579524_145580512
Length = 989
Score = 905 bits (468), Expect = 0.0
Identities = 568/614 (92%), Gaps = 28/614 (4%)
Strand = Plus / Plus
Query: 1 tatctgggatggtacttcacctcaggttctgcttgttttttattggtttttaagttgtag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 tatctgggatggtacttcacctcaggttctgcttgttttttattggtttttaagttgtag 238
Query: 61 atggagagatctttaacgatatggagtccttcaaatatattgcttcctcagggcaataaa 120
||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 239 atggagagatctttaccgatatggagtccttcaaatgtatcacttcctcagggcaataaa 298
Query: 121 actcgtg---------tc-----tct--tc-gag--atctg-cttctagtctgtctcttc 160
|||| || || ||| || | | || || ||| | ||| |||||||
Sbjct: 299 actcatgagatttttatctttgttcttgtctgtgtaatgtgtctt-t--tctctctcttc 355
Query: 161 gagacctgcttcta-----gtcttttccttgcaagtttgactctgacttgtcgagtgctc 215
|||||||||||| | |||| |||||| |||||||||||||||||||| ||||||||
Sbjct: 356 gagacctgcttcgagacctgtctgttccttacaagtttgactctgacttgttgagtgctc 415
Query: 216 agtcagtttctgtctcgttttcctttgctcttttccagttgggttggctgagagtcttga 275
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 416 agtcagtttctgtctctttttcctttgctcttttccagttcggttggctgagagtcttga 475
Query: 276 atctacagtttgacaacagagtttatttttgtatcacctttgctcattatctctccaaat 335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 atctacagtttgacaacagagtttatttttgtatcacctttgctcattatctctccaaat 535
Query: 336 gctttccctgccatgtgttcttctaggacttcaatcacacatatgttaaccatctgatgt 395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 gctttccctgccatgtgttcttctaggacttcaatcacacatatgttaaccatctgatgt 595
Query: 396 tacctctcagctcggaggatgcgggctccatttcaccactcacttgctctctgaaatgca 455
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 596 tacctctcagctcggaggatgcgggctccatttcaccactcgcttgctctctgaaatgca 655
Query: 456 atctccagggtttctatcctttaaccccttccttgacttctccacatctactcgtgagcc 515
||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 656 atcgccagagtttctatcctttaaccccttccttgacttctccacatctactcatgagcc 715
Query: 516 catcaaagcccctttccatctcagatgttatagtcttcttaatatttccatgacttcatt 575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 catcaaagcccctttccatctcagatgttatagtcttcttaatatttccatgacttcatt 775
Query: 576 tgcacatctctgat 589
||||||||||||||
Sbjct: 776 tgcacatctctgat 789
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 589
Length of database: 989
Length adjustment: 10
Effective length of query: 579
Effective length of database: 979
Effective search space: 566841
Effective search space used: 566841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no449_j24.g1 MSMg01no449_j24.g1 CHROMAT_FILE:
MSMg01no449_j24.g1 PHD_FILE: MSMg01no449_j24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:19:18 2005
(219 letters)
>mm_chr7_145768533_145769151
Length = 619
Score = 400 bits (207), Expect = e-116
Identities = 216/219 (98%)
Strand = Plus / Minus
Query: 1 tctgggaagtgaattaaaggtgaatggtagtctctcttacacacagtctttctcctggat 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 419 tctgggaagtgaattaaaggtgaatggtagtctctcttagacacagtctttctcctggat 360
Query: 61 tcctacaggcaccatctcagagctgctggcaggactgtttgagtactgatgctccaatca 120
||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 tcctacacgcatcatctcagagctgctggcaggactgtttgagtactgatgctccaatca 300
Query: 121 atcccaacttggagaagaggcatgagcacctgtgtctctacggagggagagaggggacag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 atcccaacttggagaagaggcatgagcacctgtgtctctacggagggagagaggggacag 240
Query: 181 tggggctctagtatcggggctctgggatcacatgaactc 219
|||||||||||||||||||||||||||||||||||||||
Sbjct: 239 tggggctctagtatcggggctctgggatcacatgaactc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 219
Length of database: 619
Length adjustment: 9
Effective length of query: 210
Effective length of database: 610
Effective search space: 128100
Effective search space used: 128100
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
