Query= MSMg01no453_h07.b1 MSMg01no453_h07.b1 CHROMAT_FILE:
MSMg01no453_h07.b1 PHD_FILE: MSMg01no453_h07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:24:20 2005
(690 letters)
>mm_chr7_89462928_89464018
Length = 1091
Score = 1305 bits (675), Expect = 0.0
Identities = 684/687 (99%), Gaps = 1/687 (0%)
Strand = Plus / Plus
Query: 5 gaattctctcacttgcga-tttttctgacattattttcctaagttgagcaagccttttgc 63
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctctcacttgggaatttttctgacattattttcctaagttgagcaagccttttgc 264
Query: 64 acaaaggcactggtttattttctgctgttccctgcatcccatagcctcctcagtctttca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 acaaaggcactggtttattttctgctgttccctgcatcccatagcctcctcagtctttca 324
Query: 124 cttctgattggataattgcaaataactttctgtgtttgctcagcctttcgtttggctagg 183
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 325 cttctgattggataattgcaaataactttctgtgttttctcagcctttcgtttggctagg 384
Query: 184 tctgctattgaagccatctactgaaatgaattcttcagacgttttgttcttcagctgcag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tctgctattgaagccatctactgaaatgaattcttcagacgttttgttcttcagctgcag 444
Query: 244 acctttcttctgttttccacttctttatttgacatgtcatttcattcacatgctgttttc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 acctttcttctgttttccacttctttatttgacatgtcatttcattcacatgctgttttc 504
Query: 304 cacctgtgtactcttgtaatgtgctagctaaagtgattgctttaaattattcgtaaggaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cacctgtgtactcttgtaatgtgctagctaaagtgattgctttaaattattcgtaaggaa 564
Query: 364 aatactagatttccatttcccctcatccactggtgtcatattttctttgattctttgagt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aatactagatttccatttcccctcatccactggtgtcatattttctttgattctttgagt 624
Query: 424 tcttttcagctcttggggctgccttcatgtttaaagaaaagatcaactagtggttactga 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tcttttcagctcttggggctgccttcatgtttaaagaaaagatcaactagtggttactga 684
Query: 484 ctaacttcagcagagaagggccttcccatataataattaagccctgctagacattttgaa 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ctaacttcagcagagaagggccttcccatataataattaagccctgctagacattttgaa 744
Query: 544 atctctctggcctttgctacagagttctcacttgttccatcttataggataaagactgga 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 atctctctggcctttgctacagagttctcacttgttccatcttataggataaagactgga 804
Query: 604 attacagtgttttctcttggcacttcagtgccagacatggtattgatggtgtcctacttg 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 attacagtgttttctcttggcacttcagtgccagacatggtattgatggtgtcctacttg 864
Query: 664 ttttccctagataataacctgaaatat 690
|||||||||||||||||||||||||||
Sbjct: 865 ttttccctagataataacctgaaatat 891
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 690
Length of database: 1091
Length adjustment: 10
Effective length of query: 680
Effective length of database: 1081
Effective search space: 735080
Effective search space used: 735080
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no453_h07.g1 MSMg01no453_h07.g1 CHROMAT_FILE:
MSMg01no453_h07.g1 PHD_FILE: MSMg01no453_h07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:24:20 2005
(632 letters)
>mm_chr7_89614754_89615785
Length = 1032
Score = 1195 bits (618), Expect = 0.0
Identities = 626/632 (99%), Gaps = 6/632 (0%)
Strand = Plus / Minus
Query: 1 actcaggaggcttcaaatgggtcagcctgggctgtatggcacacgcacacacgtgcacac 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 817 actcaggaggcttcaaatgggtcagcctgggctgtatggcacacgcacacacgtg----- 763
Query: 61 acacacacacacacacacacacacacacacacacacacacacaaaatggcaggttcccct 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 -cacacacacacacacacacacacacacacacacacacacacaaaatggcaggttcccct 704
Query: 121 ctagtgttacatcgcaccttcgtttctgtttcctcttcttgcatgatcgaatcctgtagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 ctagtgttacatcgcaccttcgtttctgtttcctcttcttgcatgatcgaatcctgtagt 644
Query: 181 ttctgcttcctgtcctccctgcttcctagtctctccttcctttatcccttcattccctcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 ttctgcttcctgtcctccctgcttcctagtctctccttcctttatcccttcattccctcc 584
Query: 241 tcccttccattcccataatggtctcctcaacctaggaataaataagatcctaacttcata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 tcccttccattcccataatggtctcctcaacctaggaataaataagatcctaacttcata 524
Query: 301 taacagccaggcatgaaaacgaaaatttaaatagaaaatttaagggtagaaaacaagaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 taacagccaggcatgaaaacgaaaatttaaatagaaaatttaagggtagaaaacaagaaa 464
Query: 361 caagaaaattggggccagagaagttgctgggtggctaagatcccttactgccctaacagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 caagaaaattggggccagagaagttgctgggtggctaagatcccttactgccctaacagt 404
Query: 421 ggacctgtactcagttcccagtgtccacacaacagcccatggatgtttgtaattctagct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 ggacctgtactcagttcccagtgtccacacaacagcccatggatgtttgtaattctagct 344
Query: 481 tcagaggatctcatgctcttctctcctccgacccccgtgacttctatcacgtagacgatc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 tcagaggatctcatgctcttctctcctccgacccccgtgacttctatcacgtagacgatc 284
Query: 541 ttctatcttcttctgatacatagacacgggttaaatgtatctacatacaggcacatatgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 ttctatcttcttctgatacatagacacgggttaaatgtatctacatacaggcacatatgt 224
Query: 601 gcataaaatgtaagtaaacattacaaaactag 632
||||||||||||||||||||||||||||||||
Sbjct: 223 gcataaaatgtaagtaaacattacaaaactag 192
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 50
Number of extensions: 18
Number of successful extensions: 18
Number of sequences better than 10.0: 1
Number of HSP's gapped: 11
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1032
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1022
Effective search space: 635684
Effective search space used: 635684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
