Query= MSMg01no453_k14.b1 MSMg01no453_k14.b1 CHROMAT_FILE:
MSMg01no453_k14.b1 PHD_FILE: MSMg01no453_k14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:24:36 2005
(660 letters)
>mm_chr7_145239619_145240678
Length = 1060
Score = 1062 bits (549), Expect = 0.0
Identities = 613/637 (96%), Gaps = 8/637 (1%)
Strand = Plus / Minus
Query: 8 ttccaacctgtgaatggacagtctgttataaaagatgttcttcaagttgaaaaggtgaca 67
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 904 ttccaacctgggaatggacagtctgttataaaagatgttcttcaagttgaaaaggtgaca 845
Query: 68 tttttagcttgttgatccatggattaagtttttaaaataaaacctagcttttgttttgct 127
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 844 tttttagcttgttgatccacagattaagtttttaaaataaaacctagcttttgttttgct 785
Query: 128 ttgctatagtttgaaaacgaatggaggaaactggggagaggactcagcgtgcgtcaaaca 187
||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 784 ttgctgtagtttgaaaacgaatggaggaaactggggagaggactcagcgtgtatcaaaca 725
Query: 188 agcatgaagacctgagtctgaatccacatgaaggctggatgtgctacagtgtgtctgaaa 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 agcatgaagacctgagtctgaatccacatgaaggctggatgtgctacagtgtgtctgaaa 665
Query: 248 tcccagtgctctcatggtgggatgg-gagagtgaagctaggagaatcccaggagggtcaa 306
||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 664 tcccagtgctctcgtggtgggatggtg-gagtgaagctaggagaatcccaggagggtcaa 606
Query: 307 gggcaatgcaatggcaaacagcagagatcccacctcaaatatggtgtgagggggaagctg 366
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 605 gggcaatgcaatggcaaacaacagagatcccacctcaaatatggtgtgagggggaagctg 546
Query: 367 acgccaaaggctgccctctgacttccatacatgtgcagtgccaagcacacacccacacat 426
| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 545 atgccaaaggctgccctctgacttccatatatgtgcagtgccaagcacacacccacacat 486
Query: 427 atacacactcaagaactgtga----acacacacacacggactttgaacacagacacatac 482
||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||
Sbjct: 485 atacacactcaagaactgtgaacacacacacacacacaaactgtgaacacagacacatac 426
Query: 483 aggcacacacaaaataactatgaacatagacatatacagacacagaaagcctatatacac 542
||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 425 aggcacacacaaaataactatgaacatagacatatacagacacagaaagcc--tacacac 368
Query: 543 atacatacatacactcaagagctgtgaacacagacacatacgggcacacacatggtaact 602
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 acacatacatacactcaagagctgtgaacacagacacatacgggcacacacatggtaact 308
Query: 603 gtgaacaaagacgcacacacacacacacacacacaca 639
||||||||||| |||||||||||||||||||||||||
Sbjct: 307 gtgaacaaagatgcacacacacacacacacacacaca 271
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 67
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 660
Length of database: 1060
Length adjustment: 10
Effective length of query: 650
Effective length of database: 1050
Effective search space: 682500
Effective search space used: 682500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no453_k14.g1 MSMg01no453_k14.g1 CHROMAT_FILE:
MSMg01no453_k14.g1 PHD_FILE: MSMg01no453_k14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:24:36 2005
(681 letters)
>mm_chr7_145060401_145061481
Length = 1081
Score = 1255 bits (649), Expect = 0.0
Identities = 673/681 (98%)
Strand = Plus / Plus
Query: 1 cataaagcttctggtaccagagtccaggaggggtcctcaggattctggggtggcagctca 60
||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 201 cataaagtttctggtaccagagtccaggaggggtcctcaggattctggggtggcggctca 260
Query: 61 agagtcagagtaacctcagggatgggtgtgagctagggggatgtaggggccatacctgtg 120
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agagtcagagtaaccccagggatgggtgtgagctagggggatgtaggggccatacctgtg 320
Query: 121 cagtgttgtctgggaggatacagctgagggagtggtctcagctttcacatgcaatcctgg 180
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 321 cagtgttgtctgggaggatacagccgagggagtggtctcagctttcacatgcaatcctgg 380
Query: 181 tctgagctggagataaataagtgggaatatgcacccagagatgtggaccagagcactcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctgagctggagataaataagtgggaatatgcacccagagatgtggaccagagcactcag 440
Query: 241 atagagagagtggaccaggacagaactctctagaccttctagtgggacagactggctctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atagagagagtggaccaggacagaactctctagaccttctagtgggacagactggctctg 500
Query: 301 gaaataggggatgtaggctaggaagagaggtatgagtcaaagacctccatgctccttagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 501 gaaataggggatgtaggctaggaagagaggtatgagtcaaagacctccatgcttcttagg 560
Query: 361 gctgtgctcccagatggttgaggaagagaagaggcctagcccagtagcaacacgaggatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gctgtgctcccagatggttgaggaagagaagaggcctagcccagtagcaacacgaggatg 620
Query: 421 cacacagcttgttttctggacacagctcagatctagaatgagaacatcaaaactctgcgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cacacagcttgttttctggacacagctcagatctagaatgagaacatcaaaactctgcgt 680
Query: 481 cacgcatcaggcagtggaccagacgttctgattctgggacactacttcacctgtgaagtc 540
||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 681 cacgcatcaggcagtggaccagatggtctgattctgggacactacttcacctgtgaagtc 740
Query: 541 tttggtagtgatagtgtcacaattctgattctttctctcctatgaggcacagaagaggga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tttggtagtgatagtgtcacaattctgattctttctctcctatgaggcacagaagaggga 800
Query: 601 cacaaatccctgtaaagggacacaagtccagcatgttgttcctgggctggatgctggctt 660
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 801 cacaaatccctgtaaagggacacaagtccagcgtgttgttcctgggctggatgctggctt 860
Query: 661 acgggaggaccacccttgatc 681
|||||||||||||||||||||
Sbjct: 861 acgggaggaccacccttgatc 881
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 681
Length of database: 1081
Length adjustment: 10
Effective length of query: 671
Effective length of database: 1071
Effective search space: 718641
Effective search space used: 718641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
