Query= MSMg01no454_a02.b1 MSMg01no454_a02.b1 CHROMAT_FILE:
MSMg01no454_a02.b1 PHD_FILE: MSMg01no454_a02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:25:03 2005
(523 letters)
>mm_chr7_107644596_107645518
Length = 923
Score = 1004 bits (519), Expect = 0.0
Identities = 522/523 (99%)
Strand = Plus / Plus
Query: 1 catgtctcccttcataattacataccagacaggacctctcctgtttaggatcccagagca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catgtctcccttcataattacataccagacaggacctctcctgtttaggatcccagagca 260
Query: 61 aaagactgaggggtttgcctgccaggtcctgctctgatagtcttgtcctagtcagccgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaagactgaggggtttgcctgccaggtcctgctctgatagtcttgtcctagtcagccgtt 320
Query: 121 gggataagtcccacagatcaggaacggggccttcctctgcagtctctgccaggagatcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gggataagtcccacagatcaggaacggggccttcctctgcagtctctgccaggagatcag 380
Query: 181 gagctggttggtggcttcgagggtgaccctgagccacaccccctataccaaataagagag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gagctggttggtggcttcgagggtgaccctgagccacaccccctataccaaataagagag 440
Query: 241 gagttcttcactgaatctcagttccttggcaggaattgcttcccagaccctacttgacta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gagttcttcactgaatctcagttccttggcaggaattgcttcccagaccctacttgacta 500
Query: 301 tttttggagctctctcctggtttcatcctggacccccctgagatgtgcttggtgccttga 360
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 501 tttttggagctctctcctggtttcatcctggaccctcctgagatgtgcttggtgccttga 560
Query: 361 gggaaggctgggcaggggtaggtagatggtggccagggaggggctgctgatactgatggc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gggaaggctgggcaggggtaggtagatggtggccagggaggggctgctgatactgatggc 620
Query: 421 ttctcccctcttggcctagaactccggcagagttcctctgtctcgtcttgccgattgaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttctcccctcttggcctagaactccggcagagttcctctgtctcgtcttgccgattgaag 680
Query: 481 gtccccgtttctccaatttctctccatcttctgggaggtagca 523
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gtccccgtttctccaatttctctccatcttctgggaggtagca 723
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 523
Length of database: 923
Length adjustment: 10
Effective length of query: 513
Effective length of database: 913
Effective search space: 468369
Effective search space used: 468369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no454_a02.g1 MSMg01no454_a02.g1 CHROMAT_FILE:
MSMg01no454_a02.g1 PHD_FILE: MSMg01no454_a02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:25:04 2005
(424 letters)
>mm_chr7_107834050_107834877
Length = 828
Score = 727 bits (376), Expect = 0.0
Identities = 414/428 (96%), Gaps = 4/428 (0%)
Strand = Plus / Minus
Query: 1 ttccttccccctgcccaccctactaaaagtgcctgtccctagcatttatgtcagcaaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 ttccttccccctgcccaccctactaaaagtgcctgtccctagcatttatgtcagcaaaat 569
Query: 61 acattctttttccattttgccattatttttcctgggaccctggtcacagtgcagctgggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 acattctttttccattttgccattatttttcctgggaccctggtcacagtgcagctgggt 509
Query: 121 agcagtttttggaattgttcctgccctacttctcatcttgaacgtttctctctattacag 180
||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 508 agcagtttttggaattgctcctgccctacttctcatcttgaacgtttctccctattacag 449
Query: 181 ttattttatatttgcacctctgtgccaggactgctggtttataagaccttgagacagaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 ttattttatatttgcacctctgtgccaggactgctggtttataagaccttgagacagaga 389
Query: 241 tactataaggaacacaaaccagccttcaccatgtcact-gactctgaagcaggcctccaa 299
||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 388 tactagaaggaacacaaaccagccttcaccatgtcactggactctgaagcaggcctccaa 329
Query: 300 gaggaagctgggctggaccaggtctgcaggcctaccagcgccatctgccggctaaatcct 359
||| |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 328 gagaaagctgggctgggccaggtctgcaggcctaccagcgccatctgccggctaggtcct 269
Query: 360 acatcttctgtctcaagatagatct---ccaccacctgcgacagcaagtagcccttaggt 416
||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||| |
Sbjct: 268 acatcttctgtctcaagctagatctccaccaccacctgggacagcaagtagcccttagat 209
Query: 417 tgttcctt 424
||||||||
Sbjct: 208 tgttcctt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 424
Length of database: 828
Length adjustment: 9
Effective length of query: 415
Effective length of database: 819
Effective search space: 339885
Effective search space used: 339885
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
