Query= MSMg01no454_n21.b1 MSMg01no454_n21.b1 CHROMAT_FILE:
MSMg01no454_n21.b1 PHD_FILE: MSMg01no454_n21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:26:12 2005
(456 letters)
>mm_chr7_73005682_73006537
Length = 856
Score = 866 bits (448), Expect = 0.0
Identities = 454/456 (99%)
Strand = Plus / Plus
Query: 1 gggagccaggtgctcttggaacctgagcgttggtgaggtagcttcttttgtgactcaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gggagccaggtgctcttggaacctgagcgttggtgaggtagcttcttttgtgactcaagg 260
Query: 61 ccttctctgccttgttttgctgtcttcggtttcctggtccccctcttgtattaatcaggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccttctctgccttgttttgctgtcttcggtttcctggtccccctcttgtattaatcaggc 320
Query: 121 tgaaggtttgctttctgtatgaggccagttgggaccaatgggccgtccgaggcttgcagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgaaggtttgctttctgtatgaggccagttgggaccaatgggccgtccgaggcttgcagc 380
Query: 181 catcccagcctctcattgcatcttcacagtatgaacgagtccccggtttctccaggctgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catcccagcctctcattgcatcttcacagtatgaacgagtccccggtttctccaggctgt 440
Query: 241 tcctgtatggaggggtgaggatgagtcaacttacattcacactgactggtcctagctcag 300
||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcctggagggaggggtgaggatgagtcaacttacattcacactgactggtcctagctcag 500
Query: 301 tgggtacttttaagagtgtacaccatctactgaataccaagcacgtggcaggccctgggc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgggtacttttaagagtgtacaccatctactgaataccaagcacgtggcaggccctgggc 560
Query: 361 tcatcaaaacaaacattactgtcagctgattgcaaaggaagagctgacatcctcaaaaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcatcaaaacaaacattactgtcagctgattgcaaaggaagagctgacatcctcaaaaca 620
Query: 421 gcccgatggatggatagatgctattgttatccgcat 456
||||||||||||||||||||||||||||||||||||
Sbjct: 621 gcccgatggatggatagatgctattgttatccgcat 656
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 456
Length of database: 856
Length adjustment: 10
Effective length of query: 446
Effective length of database: 846
Effective search space: 377316
Effective search space used: 377316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no454_n21.g1 MSMg01no454_n21.g1 CHROMAT_FILE:
MSMg01no454_n21.g1 PHD_FILE: MSMg01no454_n21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:26:12 2005
(454 letters)
>mm_chr7_73115145_73116000
Length = 856
Score = 845 bits (437), Expect = 0.0
Identities = 452/457 (98%), Gaps = 4/457 (0%)
Strand = Plus / Minus
Query: 1 acactgagaaacagaccctgtacactggcaaaatctgctacaaaaggacaggagggctct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 acactgagaaacagaccctgtacactggcaaaatctgctacaaaaggacaggagggctct 597
Query: 61 aaacagtccatttggaagagcatctttccctagctgcacaatgtgttaagacaaaactca 120
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 aaacagttcatttggaagagcatctttccctagctgcacaatgtgttaagacaaaactca 537
Query: 121 ggcacatctaggtggaaactgcccgtgtgatccttcctgcctgtgaagagagatggaggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 ggcacatctaggtggaaactgcccgtgtgatccttcctgcctgtgaagagagatggaggg 477
Query: 181 ttaaacacctccccccctccccctgccacacagccaggtctcatgagaagtcactggtgt 240
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 ttaaacacct-cccccctccccctgccacacagccaggtctcatgagaagtcactggtgt 418
Query: 241 cagagcagagccttacctgggccttttgtctgcggtggccacgcatacgtgctgggaggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 cagagcagagccttacctgggccttttgtctgcggtggccacgcatacgtgctgggaggg 358
Query: 301 cactgccgtccacttcctcgcctccaggaccagagcttctgcatccaccaagccaaatcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 cactgccgtccacttcctcgcctccaggaccagagcttctgcatccaccaagccaaatcc 298
Query: 361 atagagatggctaactg-aaaaaacagggccttcagatccagcctctctgcctcccgcaa 419
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 atagagatggctaactgaaaaaaacagggccttcagatccagcctctctgcctcccgcaa 238
Query: 420 gaagggcgctgtccccc-c-aaatgtgtggatctcag 454
||||||||||||||||| | |||||||||||||||||
Sbjct: 237 gaagggcgctgtccccctcaaaatgtgtggatctcag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 454
Length of database: 856
Length adjustment: 10
Effective length of query: 444
Effective length of database: 846
Effective search space: 375624
Effective search space used: 375624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
