Query= MSMg01no457_o21.b1 MSMg01no457_o21.b1 CHROMAT_FILE:
MSMg01no457_o21.b1 PHD_FILE: MSMg01no457_o21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:20 2005
(486 letters)
>mm_chr7_72345761_72346646
Length = 886
Score = 855 bits (442), Expect = 0.0
Identities = 477/490 (97%), Gaps = 4/490 (0%)
Strand = Plus / Plus
Query: 1 cagattcttgagttcaccgttagtcccatttgccctacaaagttccccatccttcgcctc 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 cagattcttgagttcactgttagtcccatttgccctacaaagttccccatccttcgcctc 259
Query: 61 tttgactccttcggtcagctttggcagccatcgatacctctattgtctccatatttttgt 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 260 tttgactccttcggtcagctttggcagccatcgatacctctattttctccatatttttgt 319
Query: 121 tttttcatgactgtcatagggttggaactttacagcacgtcatcttttggacagact-ct 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 320 tttttcatgactgtcatagggttggaactttacagcacgtcatcttttggacagactcct 379
Query: 180 ttcaattattgatgcgtatgtgtacagtaagatcatccacactttcactcctgctttact 239
||||||||| ||| ||||||||| |||||||||||||||| |||||||||||||||| ||
Sbjct: 380 ttcaattatcgatacgtatgtgtgcagtaagatcatccacgctttcactcctgcttttct 439
Query: 240 tccttgcttcttgaccccttgctctggccccacctctccccattccctgccctctctctc 299
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 440 tccttgcttcttgaccccttgctctggtcccacctctccccattccctgccctctctctc 499
Query: 300 atggccagcctctgcttctctcctctctcctctctgcctttctctgcctctattgccctc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 atggccagcctctgcttctctcctctctcctctctgcctttctctgcctctattgccctc 559
Query: 360 ttaattcccctctctcttactcttgcttcctgcttccccccccc---attcctttcctcc 416
|||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct: 560 ttaattcccctctctcttactcttgcttcctgctccccccccccccaattcctttcctcc 619
Query: 417 ctctctccacatggccatgaccggcctctacttctctactctctccttctctctgccttt 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ctctctccacatggccatgaccggcctctacttctctactctctccttctctctgccttt 679
Query: 477 ctctgcctct 486
||||||||||
Sbjct: 680 ctctgcctct 689
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 486
Length of database: 886
Length adjustment: 10
Effective length of query: 476
Effective length of database: 876
Effective search space: 416976
Effective search space used: 416976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no457_o21.g1 MSMg01no457_o21.g1 CHROMAT_FILE:
MSMg01no457_o21.g1 PHD_FILE: MSMg01no457_o21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:20 2005
(451 letters)
>mm_chr7_72514452_72515297
Length = 846
Score = 841 bits (435), Expect = 0.0
Identities = 445/451 (98%), Gaps = 5/451 (1%)
Strand = Plus / Minus
Query: 1 ctgcacaaaacaacttgcctattttcctgtgtgctttgaagtgtgcttcttgacagtgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 ctgcacaaaacaacttgcctattttcctgtgtgctttgaagtgtgcttcttgacagtgtg 587
Query: 61 ttatattattattacattaggctaaaattcttaaagatgaagtagaacccttcttttgta 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 586 ttatattattattacattaggctaaaattcttaaagatgaagtagaatccttcttttgta 527
Query: 121 cgttttaattaaaaaaaaatcctaaagtgcttgctttttcaatgacagacatacagtgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 cgttttaattaaaaaaaaatcctaaagtgcttgctttttcaatgacagacatacagtgtg 467
Query: 181 agaaaaatcaatccgttattcaaacagcttaaacaggtggtgattttatgtagttttcta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 agaaaaatcaatccgttattcaaacagcttaaacaggtggtgattttatgtagttttcta 407
Query: 241 tttgaaatacttaatcataacctttgagaatagatggaaatttctgaattcttgacagga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 tttgaaatacttaatcataacctttgagaatagatggaaatttctgaattcttgacagga 347
Query: 301 ccttgtttctttggcagatacaaggtttagtatagattgttttaaggaatagagtattgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 ccttgtttctttggcagatacaaggtttagtatagattgttttaaggaatagagtattgc 287
Query: 361 tcctgtaggagtaatttagtttgtatcttttttttttttttgagcaaacattgataagag 420
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 286 tcctgtaggagtaatttagtttgtatc-----tttttttttgagcaaacattgataagag 232
Query: 421 atctaaaagaaagactgggtccaaaaactag 451
|||||||||||||||||||||||||||||||
Sbjct: 231 atctaaaagaaagactgggtccaaaaactag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 846
Length adjustment: 10
Effective length of query: 441
Effective length of database: 836
Effective search space: 368676
Effective search space used: 368676
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
