Query= MSMg01no458_a19.b1 MSMg01no458_a19.b1 CHROMAT_FILE:
MSMg01no458_a19.b1 PHD_FILE: MSMg01no458_a19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:31 2005
(329 letters)
>mm_chr7_96859085_96859815
Length = 731
Score = 605 bits (313), Expect = e-177
Identities = 326/331 (98%), Gaps = 2/331 (0%)
Strand = Plus / Plus
Query: 1 aagagggagtctgtctgctttgtacagaataccttgcccagggcagctgtttgctctctt 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagagggagtctgtctgctttgtgcagaataccttgcccagggcagctgtttgctctctt 260
Query: 61 ttgttatctgagtggtagaaggctggagaacttctgaccttccacattcatttgtcacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgttatctgagtggtagaaggctggagaacttctgaccttccacattcatttgtcacaa 320
Query: 121 taatcatgaactggggacaagggcatacaccagtgagtcattttcctggtagtgagccaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taatcatgaactggggacaagggcatacaccagtgagtcattttcctggtagtgagccaa 380
Query: 181 gcccaccttcgtcatctctagtcaacttcttgttttggggttttgtgttgttttccttca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcccaccttcgtcatctctagtcaacttcttgttttggggttttgtgttgttttccttca 440
Query: 241 tccacattcacactgaatgctcacagccact--gtacagaaggatgtcatgtttatagat 298
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 441 tccacattcacactgaatgctcacagccactctgtacagaaggatgtcatgtttatagat 500
Query: 299 gaccatagatgattctgagaacaatggaaga 329
||||||||| |||||| ||||||||||||||
Sbjct: 501 gaccatagacgattctcagaacaatggaaga 531
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 329
Length of database: 731
Length adjustment: 9
Effective length of query: 320
Effective length of database: 722
Effective search space: 231040
Effective search space used: 231040
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no458_a19.g1 MSMg01no458_a19.g1 CHROMAT_FILE:
MSMg01no458_a19.g1 PHD_FILE: MSMg01no458_a19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:31 2005
(553 letters)
>mm_chr7_97057488_97058440
Length = 953
Score = 992 bits (513), Expect = 0.0
Identities = 543/553 (98%)
Strand = Plus / Minus
Query: 1 tccccagtcgatggagtccaaggtagagagcagcacttggcactgcccgttctctccctc 60
||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 753 tccccagtcgatggagtccaaggtacagagcagcacgtggcactgcccgttctctccctc 694
Query: 61 acctttcgagagagccaggtaggactgcctgctcaagctgtcaggaaccaaacatctcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 693 acctttcgagagagccaggtaggactgcctgctcaagctgtcaggaaccaaacatctgaa 634
Query: 121 gaacaaatcttgcttctgttctctttatgaaagccactctttatgttctctttatgaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 gaacaaatcttgcttctgttctctttatgaaagccactctttatgttctctttatgaaag 574
Query: 181 caccggataaagttccagcccctttgtatctcgtaaactctcttgtgggatgttcctact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 caccggataaagttccagcccctttgtatctcgtaaactctcttgtgggatgttcctact 514
Query: 241 ggatgtgtttttgcacgcccccaccccccatctgcgtcgtatctatatgctcctctcccg 300
|||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 513 ggatgtgtatgtgcacgcccccaccccccatctgcatcgtatctatatgctcctctcccg 454
Query: 301 agggagatctctatggggagtcggtgtgggggagagtaggggccagctgaggagtccctg 360
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 453 agggagatctctatggggagtcggtgtgggggagagtaagggccagctgaggagtccctg 394
Query: 361 ccagctgcagctgtttttctcctaaagtaaaagatttgatgtgctgttaggtggattaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 393 ccagctgcagctgtttttctcctaaagtaaaagatttgatgtgctgttaggtgaattaat 334
Query: 421 ttctatcccagaactacacaatctaatctacattaggcaagtctgtctaattttcctact 480
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 333 ttctatcccagaactacacaatctaatctacattaggcaaatctgtctaattttcctact 274
Query: 481 ggcatttgttcttcctctggtttttgacggatcggatcgtcatgttaacagcatgcggtt 540
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 273 ggcatttgttcttcctctggtttttgacggatcggatcggcatgttaacagcatgcggtt 214
Query: 541 ctgctggaaccgc 553
|||||||||||||
Sbjct: 213 ctgctggaaccgc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 553
Length of database: 953
Length adjustment: 10
Effective length of query: 543
Effective length of database: 943
Effective search space: 512049
Effective search space used: 512049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
