Query= MSMg01no458_d02.b1 MSMg01no458_d02.b1 CHROMAT_FILE:
MSMg01no458_d02.b1 PHD_FILE: MSMg01no458_d02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:42 2005
(511 letters)
>mm_chr7_150451352_150452262
Length = 911
Score = 949 bits (491), Expect = 0.0
Identities = 506/511 (99%)
Strand = Plus / Plus
Query: 1 gggccagcctatgccttctggaaggggagcattagtggactagggggctagctcttctga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gggccagcctatgccttctggaaggggagcattagtggactagggggctagctcttctga 260
Query: 61 tgggactgctttgcctgggatattcagggcctggagacaatcagggcctgctgtggtacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgggactgctttgcctgggatattcagggcctggagacaatcagggcctgctgtggtacc 320
Query: 121 tcagtgagcacccatttctcttacttggcttctcaacctgcaaatgatgatggaagaaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 321 tcagtgagcacccatttctcttacttggcttctcaacctgcaaatgatgatgggagaaga 380
Query: 181 tggaggggccatgttgggggcagtgtccaggaggatagggaaggggacttgtcaagaaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tggaggggccatgttgggggcagtgtccaggaggatagggaaggggacttgtcaagaaca 440
Query: 241 gatgagattattttgtctttccagactagtgtcctgtcttctgtgaatatccagaccacc 300
||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gatgagaccagtttgtctttccagactagtgtcctgtcttctgtgaatatccagaccacc 500
Query: 301 tctgtctgcataaggtgccaaagaagccccatgagagccctcccgggagggctgtgcaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tctgtctgcataaggtgccaaagaagccccatgagagccctcccgggagggctgtgcaag 560
Query: 361 gctgtatgagtcacaggatccctgtcagagccccacaaggccccggccaggctcaaaccc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gctgtatgagtcacaggatccctgtcagagccccacaaggccccggccaggctcaaaccc 620
Query: 421 gtctctgaaatgcacgggggattaaatgttctcctaattaaattaaaagcgaggcggagt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtctctgaaatgcacgggggattaaatgttctcctaattaaattaaaagcgaggcggagt 680
Query: 481 ggctcagtggctcagtgagaaagagagggac 511
||||||||||||||||| |||||||||||||
Sbjct: 681 ggctcagtggctcagtgggaaagagagggac 711
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 911
Length adjustment: 10
Effective length of query: 501
Effective length of database: 901
Effective search space: 451401
Effective search space used: 451401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no458_d02.g1 MSMg01no458_d02.g1 CHROMAT_FILE:
MSMg01no458_d02.g1 PHD_FILE: MSMg01no458_d02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:43 2005
(431 letters)
>mm_chr7_150631453_150632283
Length = 831
Score = 770 bits (398), Expect = 0.0
Identities = 423/436 (97%), Gaps = 10/436 (2%)
Strand = Plus / Minus
Query: 1 tttctgaagctgcctagttacaccctgattctggtgggtcagaagtctccccc-ggtgca 59
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 631 tttctgaagctgcctagttacaccctgattctggtgggtcagaagtctcccccgggtgcg 572
Query: 60 tgccctgcaggcgggaccgctgcagccggaggccaccccaggacagagggaggcagagta 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 tgccctgcaggcgggaccgctgcagccggaggccaccccaggacagagggaggcagagta 512
Query: 120 ggcctcaggggctcagttgggggtgcaggcagctgcgcccaggcagaagggcagacgcgc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 ggcctcaggggctcagttgggggtgcaggcagctgcgcccaggcagaagggcagacgcgc 452
Query: 180 gccacggtggcccggatcgctctgccgggaccgacgaccgagcctccccctcccggcca- 238
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 gccacggtggcccggatcgctctgccgggaccgacgaccgagcctccccctcccggccaa 392
Query: 239 ---aggtttttattcggcccgccggtcctcggggaggggcgggaaggcagctggacccgg 295
||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 ggcagg-----actcggcccgccggtcctcggggaggggcgggaaggcagctggacccgg 337
Query: 296 cggcgatttatgggcctttcaggcgagcaggtgcctcctcgggccgctcattgtctcacg 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 cggcgatttatgggcctttcaggcgagcaggtgcctcctcgggccgctcattgtctcacg 277
Query: 356 ggcttcacaatggggctgcggcagccgtagagcctcccccgccgtgcctcgaggtctgca 415
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 276 ggcttcacaatggggctgcggcagccgtagagcctcccccgccgtgcctcgaggcctgca 217
Query: 416 cgggcaccacgccgga 431
||||||||||||||||
Sbjct: 216 cgggcaccacgccgga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 431
Length of database: 831
Length adjustment: 9
Effective length of query: 422
Effective length of database: 822
Effective search space: 346884
Effective search space used: 346884
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
