Query= MSMg01no458_k14.b1 MSMg01no458_k14.b1 CHROMAT_FILE:
MSMg01no458_k14.b1 PHD_FILE: MSMg01no458_k14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:31:19 2005
(573 letters)
>mm_chr7_141344162_141345134
Length = 973
Score = 988 bits (511), Expect = 0.0
Identities = 558/574 (97%), Gaps = 2/574 (0%)
Strand = Plus / Minus
Query: 1 caaatgaacatgtttgatgctttataaagaacggatgaatgtttgaccgcttcatcattg 60
|||||||||||||||||||||| |||||||||||||||||| |||| ||||||||||||
Sbjct: 773 caaatgaacatgtttgatgcttcataaagaacggatgaatgcgtgacagcttcatcattg 714
Query: 61 gagaaaagtgtgactgggggaagcttctgaacttccaagatggttctctcacttacagac 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 gagaaaagtatgactgggggaagcttctgaacttccaagatggttctctcacttacagac 654
Query: 121 tactgtcaattctaatcactacagggagagaattttagcttaccttcatcctgagattct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 653 tactgtcaattctaatcactacagggagagaattttagcttaccttcatcctgagatcct 594
Query: 181 tgcccattcacacaatggtcaatgtgataggtaccatgacaatggtcttacggtcaggaa 240
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 593 tgcccattcacacaatggtcaatgtgataggtaccatgacaatggtctcacggtcaggaa 534
Query: 241 ttataatcngtttgctatgaattaagtagccaacttattcttaaagctggattgcagcaa 300
|||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 533 ttataaactgtttgctatgaattaagtaaccaacttattcttaaagctggattgcagcaa 474
Query: 301 tgccagcatttacatgcttcttccttgttctctagtcttgcaaagtaaggttatgctcaa 360
|||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 473 tgccagcatttaaatgcttcttccttgctctctagtcttgcaaagtaaggttatgctcaa 414
Query: 361 agtacagtgccttctactataa-gcttccttgacggcccagaatagcctgccttgagaaa 419
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 413 agtacagtgccttctactataaggcttccttgacggcccagaatagcctgccttgagaaa 354
Query: 420 tggccccttgcacaccaatgtctctgctgctttctcactggatctcaatagctctttagc 479
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 tggccccttgcacaccgatgtctctgctgctttctcactggatctcaatagctctttagc 294
Query: 480 tattcccactgatcatgtaaggccaacttagcaggaaaaaaaaaatgacagctaagcctg 539
||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 293 tattcccactgatcatgtaaggccaacttagcagg-aaaaaaaaatgactgctaagcctg 235
Query: 540 gaagagccatgcaggtctgtctgtgcttctcctg 573
||||||||||||||||||||||||||||||||||
Sbjct: 234 gaagagccatgcaggtctgtctgtgcttctcctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 573
Length of database: 973
Length adjustment: 10
Effective length of query: 563
Effective length of database: 963
Effective search space: 542169
Effective search space used: 542169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no458_k14.g1 MSMg01no458_k14.g1 CHROMAT_FILE:
MSMg01no458_k14.g1 PHD_FILE: MSMg01no458_k14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:31:19 2005
(241 letters)
>mm_chr7_141244692_141245331
Length = 640
Score = 232 bits (120), Expect = 1e-65
Identities = 135/140 (96%), Gaps = 1/140 (0%)
Strand = Plus / Plus
Query: 9 agctcaggttggtagagtggtagaaagcaactctatttgcgacagctgtaacacaccaga 68
||||||||||||||||||||||||| ||||||| ||||| ||||||||||||||||| ||
Sbjct: 209 agctcaggttggtagagtggtagaaggcaactcaatttg-gacagctgtaacacaccgga 267
Query: 69 gacgtataacagacatggggaaatatatgatttcccagtcacaagactgagcaggacaga 128
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 gacgtataacagacatagggaaatatatgatttcccagtcacaagactgagcaggacaga 327
Query: 129 agcagagggtttcattcatt 148
||||||||||||||||||||
Sbjct: 328 agcagagggtttcattcatt 347
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 640
Length adjustment: 9
Effective length of query: 232
Effective length of database: 631
Effective search space: 146392
Effective search space used: 146392
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
