Query= MSMg01no459_j13.b1 MSMg01no459_j13.b1 CHROMAT_FILE:
MSMg01no459_j13.b1 PHD_FILE: MSMg01no459_j13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:32:34 2005
(477 letters)
>mm_chr7_109044803_109045679
Length = 877
Score = 915 bits (473), Expect = 0.0
Identities = 476/477 (99%)
Strand = Plus / Minus
Query: 1 ggctagtcccaaactcacagagctccgcatgcctcagcccccggatgctgggattaaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776 ggctagtcccaaactcacagagctccgcatgcctcagcccccggatgctgggattaaagg 717
Query: 61 cgtataccagcccccacacccggccctactctagcttttgttccaacttaatttgaccca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 cgtataccagcccccacacccggccctactctagcttttgttccaacttaatttgaccca 657
Query: 121 cgcagaactagacgctgtcattccctagaccaaagcccccccaggtccgtgtgatgggga 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 cgcagaactagacgctgtcattccctagaccaaagcccccccaggtccgtgtgatggggg 597
Query: 181 aaaaaaaaaaaggcgcgtccaccacgatcccgaaagcactgacagattttatatactaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 aaaaaaaaaaaggcgcgtccaccacgatcccgaaagcactgacagattttatatactaaa 537
Query: 241 attctacccaccaccgcccattctttgctcattatgataatgactgcgagattgaccaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 attctacccaccaccgcccattctttgctcattatgataatgactgcgagattgaccaac 477
Query: 301 aggaaggaggcaggggcgggtctccgtcaggattttgaccttatagggatgctaatcgca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 aggaaggaggcaggggcgggtctccgtcaggattttgaccttatagggatgctaatcgca 417
Query: 361 aaatgcgcgcggcctggccgaagccaattaactgcaagaaatgctgggtgacaggaagtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 aaatgcgcgcggcctggccgaagccaattaactgcaagaaatgctgggtgacaggaagtg 357
Query: 421 aaaccaatgcatgacggaccatgtgcgatgggtggggcttagactctaggaaacggc 477
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 aaaccaatgcatgacggaccatgtgcgatgggtggggcttagactctaggaaacggc 300
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 477
Length of database: 877
Length adjustment: 10
Effective length of query: 467
Effective length of database: 867
Effective search space: 404889
Effective search space used: 404889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no459_j13.g1 MSMg01no459_j13.g1 CHROMAT_FILE:
MSMg01no459_j13.g1 PHD_FILE: MSMg01no459_j13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:32:34 2005
(391 letters)
>mm_chr7_108854262_108855052
Length = 791
Score = 712 bits (368), Expect = 0.0
Identities = 390/408 (95%), Gaps = 17/408 (4%)
Strand = Plus / Plus
Query: 1 atgcatttgtggctgtgtggatgtgtagaacaaagcatatgtgatcaagttgcttttcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 atgcatttgtggctgtgtggatgtgtagaacaaagcatatgtgatcaagttgcttttcct 243
Query: 61 tacatcctactgtccttcctctcggtcatacctcgggtga-----------------ctc 103
|||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 244 tacatcctactgtccttcctctcggtcatacctcgggtgaagtgctgacctcttagactc 303
Query: 104 ctgttgtgtttgtcctgtttctgtcttactccagctcctcctgtgccctcctgtgcactt 163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 ctgttgtgtttgtcctgtttctgtcttactccagctcctcctgtgccctcctgtgcactt 363
Query: 164 ctccatcctaacgctttgctgtaatgcttttagcctcctttagaagctcaattcctgggt 223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 ctccatcctaacgctttgctgtaatgcttttagcctcctttagaagctcaattcctgggt 423
Query: 224 atgtttctagtaattaaatttctccttagacagttttatataaatacggattatattgac 283
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 424 atgtttctagtaattaaatttgtccttagacagttttatataaatacggattatattgac 483
Query: 284 cctctcagccttcacccctcccttatccctatcaccactgttcttacccccacccccaat 343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 cctctcagccttcacccctcccttatccctatcaccactgttcttacccccacccccaat 543
Query: 344 ctctcaacttcatatctatttgtattatttttctttgcttccctctta 391
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 ctctcaacttcatatctatttgtattatttttctttgcttccctctta 591
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 391
Length of database: 791
Length adjustment: 9
Effective length of query: 382
Effective length of database: 782
Effective search space: 298724
Effective search space used: 298724
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
