Query= MSMg01no459_n02.b1 MSMg01no459_n02.b1 CHROMAT_FILE:
MSMg01no459_n02.b1 PHD_FILE: MSMg01no459_n02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:32:53 2005
(265 letters)
>mm_chr7_37076958_37077622
Length = 665
Score = 400 bits (207), Expect = e-116
Identities = 219/223 (98%)
Strand = Plus / Minus
Query: 22 cattggtccaagaccagaccacaggcagctatggctcctcagctcacactatcctggaat 81
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 389 cattggtccaagaccagaccacaggcagctatggctcctcagctcacaccatcctggtat 330
Query: 82 gtgtatggtcaagagagctaaagctgagtgaggcatattaactcataattttaatctcaa 141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 gtgtatggtcaagagagctaaagctgagtgaggcatattaactcataattttaatctcaa 270
Query: 142 cccacaggaatattgcctgcatgtaatgagactcttgcccctctcaaaagataatagata 201
|||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 269 cccacaggaatattgcctgcatataatgagactcttgcccctctcaaaatataatagata 210
Query: 202 gatagatagatagatagatagatagatagatagatagatagat 244
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 gatagatagatagatagatagatagatagatagatagatagat 167
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 15
Number of successful extensions: 15
Number of sequences better than 10.0: 1
Number of HSP's gapped: 14
Number of HSP's successfully gapped: 1
Length of query: 265
Length of database: 665
Length adjustment: 9
Effective length of query: 256
Effective length of database: 656
Effective search space: 167936
Effective search space used: 167936
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no459_n02.g1 MSMg01no459_n02.g1 CHROMAT_FILE:
MSMg01no459_n02.g1 PHD_FILE: MSMg01no459_n02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:32:53 2005
(313 letters)
>mm_chr7_36892720_36893432
Length = 713
Score = 435 bits (225), Expect = e-126
Identities = 267/299 (89%), Gaps = 30/299 (10%)
Strand = Plus / Plus
Query: 15 ctctctctctctctctctctctctctctctctctctctctctctctctctctttacatgt 74
||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 245 ctctctctctctctctctctctctctctctctctctctctctctctctctc----cat-- 298
Query: 75 gtatccgtaaagagatctttacatgtttatccatgtccaaaggggtcagactgaggatgt 134
||| |||||||||||||||||||||||||||||||||
Sbjct: 299 -----------gag-------------tatccatgtccaaaggggtcagactgaggatgt 334
Query: 135 tggatctgatagagccttgagttataggtggttgtgagctctggctgttggtaagagcaa 194
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tggatctgatagagctttgagttataggtggttgtgagctctggctgttggtaagagcaa 394
Query: 195 tgagcacctttaacctctgcgctgcctctccaggtcccacagacttcgtctttttctatt 254
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tgagcacctttaacctctgggctgcctctccaggtcccacagacttcgtctttttctatt 454
Query: 255 tgattgtctgatttgtaaaagttggttgttttctgtgtcgcaatacattctcatttaat 313
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 tgattgtctgatttgtaaaagttggttgttttctgtgtcgcaatacattctcatttaat 513
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 65
Number of extensions: 30
Number of successful extensions: 30
Number of sequences better than 10.0: 1
Number of HSP's gapped: 27
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 713
Length adjustment: 9
Effective length of query: 304
Effective length of database: 704
Effective search space: 214016
Effective search space used: 214016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
