Query= MSMg01no459_n05.b1 MSMg01no459_n05.b1 CHROMAT_FILE:
MSMg01no459_n05.b1 PHD_FILE: MSMg01no459_n05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:32:53 2005
(412 letters)
>mm_chr7_88619527_88620338
Length = 812
Score = 708 bits (366), Expect = 0.0
Identities = 400/412 (97%), Gaps = 5/412 (1%)
Strand = Plus / Plus
Query: 5 gaattccttattcct-ctgcttcc-ccacctgagtggcaggatgacaggcatgtgctaca 62
||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 202 gaattccttat-ccttctgcttctaccacctgagtggcaggatgacaggcatgtgctaca 260
Query: 63 tcatcccgtttatggggtactggggatcaaacccacgcccttgtgcacactaagcaaggg 122
|||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcatcctgtttatggggtgctggggatcaaacccacgcccttgtgcacactaagcaaggg 320
Query: 123 ctctc--cccagaccccctgggtccctagatccagtatcagaagtagtagtagacacact 180
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctctctccccagaccccctgggtccctagatccagtatcagaagtagtagtagacacact 380
Query: 181 aacgtgtgaggaaagttagtcactgtccaatgacatcgcccactaataaagcattagaat 240
|||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 381 aacgagtgaggaaagttagtcactgtccaatgacatcgcccaataataaagcattagaat 440
Query: 241 gggaaagggaaggaggcacaggatctcaaagctttgcctgttggtgtatgtgttccagaa 300
||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 441 gggaaagggaaggaggcacaggatcccaacgctttgcctgttggtgtatgtgttccagaa 500
Query: 301 agtctgaaggggcaggtacatgagagacagaactgcagagtttgatgacttcacactagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agtctgaaggggcaggtacatgagagacagaactgcagagtttgatgacttcacactagt 560
Query: 361 aacatcacttcctggagtctacaattaaaatataaaatgcaagcgatacagg 412
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aacatcacttcctggagtctacaattaaaatataaaatgcaagcgatacagg 612
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 412
Length of database: 812
Length adjustment: 9
Effective length of query: 403
Effective length of database: 803
Effective search space: 323609
Effective search space used: 323609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no459_n05.g1 MSMg01no459_n05.g1 CHROMAT_FILE:
MSMg01no459_n05.g1 PHD_FILE: MSMg01no459_n05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:32:53 2005
(456 letters)
>mm_chr7_88791167_88792022
Length = 856
Score = 797 bits (412), Expect = 0.0
Identities = 438/456 (96%), Gaps = 15/456 (3%)
Strand = Plus / Minus
Query: 1 agagactaagccagagcttctcaggctgcctcccaccgtgtccctggtcaccttagatgt 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 823 agagactaagccagagctgctcaggctgcctcccaccgtgtccctggtcaccttagatgt 764
Query: 61 tcttaaagtccacttagagttccagcttcactactgcggcatggagaactgcagcagaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 tcttaaagtccacttagagttccagcttcactactgcggcatggagaactgcagcagaga 704
Query: 121 gccttgtttggcaaagggagcaaaaggctagggaatgagggttagacctagtcattgaaa 180
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 gccttgtttggcaaagggagcaaaaggctagggaatgagggttagac------------- 657
Query: 181 tactattcctgtctctaggagctggggacaggggcaggtctcttgtcccaataatactag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 --ctattcctgtctctaggagctggggacaggggcaggtctcttgtcccaataatactag 599
Query: 241 atgttccagaaccaccacagtcctgcttgactctcccttgacagcagcaagtaagatggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 atgttccagaaccaccacagtcctgcttgactctcccttgacagcagcaagtaagatggg 539
Query: 301 taggaaacatcaagagagaaccttgtgcttccagcttccatagttaggcagggagtggag 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 caggaaacatcaagagagaaccttgtgcttccagcttccatagttaggcagggagtggag 479
Query: 361 tcaggacctcactcagaccattctaggtatcaccacccggcttaccctactttgcccagt 420
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 478 tcaggacctcactcagaccattctaggtatcaccacccggcttacccttctttgcccagt 419
Query: 421 actgaagtcttgctgcctcgaagcccagctcctgcc 456
||||||||||||||||||||||||||||||||||||
Sbjct: 418 actgaagtcttgctgcctcgaagcccagctcctgcc 383
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 456
Length of database: 856
Length adjustment: 10
Effective length of query: 446
Effective length of database: 846
Effective search space: 377316
Effective search space used: 377316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|