Query= MSMg01no461_m15.b1 MSMg01no461_m15.b1 CHROMAT_FILE:
MSMg01no461_m15.b1 PHD_FILE: MSMg01no461_m15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:35:31 2005
(235 letters)
>mm_chr7_100127178_100127812
Length = 635
Score = 410 bits (212), Expect = e-119
Identities = 230/236 (97%), Gaps = 1/236 (0%)
Strand = Plus / Minus
Query: 1 gggggggg-tggaaacaccctcatagaagcaagggaatgggggatgaaacagggggtttc 59
|||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 563 ggggggggatggaaacaccctcatagaagcaagggaatgggggatgaaatagggggtttc 504
Query: 60 gggggatgggaaccagaaaaggggataacatttgaaatgtagataaagaaaatatccaat 119
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 gggggatggaaaccagaaaaggggataacatttgaaatgtagataaagaaaatatccaat 444
Query: 120 ttaaaaaagtagctaacagcagctgttgttaattattgcttgcagtgtgtcagatattgc 179
| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 443 taaaaaaagtagctaacagcagctgttgttaattattgcttgcagtgtgtcagatactgt 384
Query: 180 tctaactgcacctgtaataattcacttaaatagcacactggacaagaatcaggcac 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tctaactgcacctgtaataattcacttaaatagcacactggacaagaatcaggcac 328
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 235
Length of database: 635
Length adjustment: 9
Effective length of query: 226
Effective length of database: 626
Effective search space: 141476
Effective search space used: 141476
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no461_m15.g1 MSMg01no461_m15.g1 CHROMAT_FILE:
MSMg01no461_m15.g1 PHD_FILE: MSMg01no461_m15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:35:32 2005
(466 letters)
>mm_chr7_99923890_99924755
Length = 866
Score = 857 bits (443), Expect = 0.0
Identities = 460/471 (97%), Gaps = 10/471 (2%)
Strand = Plus / Plus
Query: 1 aagttgcagcctgcttcctgaaactggctgttgcgcctgtgtgtgcttggcccataagtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagttgcagcctgcttcctgaaactggctgttgcgcctgtgtgtgcttggcccataagtg 260
Query: 61 agggtgtcatgtccctgtgatacgcccttctcaagagacacttgcctggcttggaaaatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agggtgtcatgtccctgtgatacgcccttctcaagagacacttgcctggcttggaaaatg 320
Query: 121 gttcccactcagtgcatgagctgtcagactgggtggggctcagtatgatcacctaggagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gttcccactcagtgcatgagctgtcagactgggtggggctcagtatgatcacctaggagt 380
Query: 181 gtcaagcactgagctttcattggggcacagaacacagttcctgagagctatgtgagtttt 240
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtcaagcacagagctttcattggggcacagaacacagttcctgagagctatgtgag---- 436
Query: 241 tc-----tggcaacacgtagctcctgtcttgtcaagatggattgggatgctctgtctaga 295
| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 -caaacctggcaacacgtagctcctgtcttgtcaagatggattgggatgctctgtctaga 495
Query: 296 cagtcccttcctttgggaaatcagttgctctaggtagaggcacatggtctcctgttaaga 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 cagtcccttcctttgggaaatcagttgctctaggtagaggcacatggtctcctgttaaga 555
Query: 356 atatgaaatgagcctgtgtgtggttgggtggaggctgctgtaagcttgtgtggattgatg 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 atatgaaatgagcctgtgtgtggttgggtggaggctgctgtaagcttgtgtggattgatg 615
Query: 416 aggtagtgtgcaggaaggagctgctggtctctcacacatgggggtctctgg 466
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 aggtagtgtgcaggaaggagctgctggtctctcacacatgggggtctctgg 666
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 866
Length adjustment: 10
Effective length of query: 456
Effective length of database: 856
Effective search space: 390336
Effective search space used: 390336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
