Query= MSMg01no462_j03.b1 MSMg01no462_j03.b1 CHROMAT_FILE:
MSMg01no462_j03.b1 PHD_FILE: MSMg01no462_j03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:36:37 2005
(404 letters)
>mm_chr7_150790303_150791106
Length = 804
Score = 613 bits (317), Expect = e-180
Identities = 349/365 (95%), Gaps = 13/365 (3%)
Strand = Plus / Minus
Query: 1 caccaatgagagcaaaactttacttctgaccatagggcacacagaggcagaacagcaagc 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 359 caccaatgagagcaaaactttacttctgaccatagggcacacaggggcagaacagcaagc 300
Query: 61 aagcatacagggatagaaagtttactcagttcttattttaacacaggtggtgattgtgac 120
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 299 aagcatacagggatagaaagtttactcagttcttattctaacacaggtggtgattgtgac 240
Query: 121 ttttccccattgtctgcggttttttaaggtgcacaggtagggctatagagttgactcacg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 ttttccccattgtctgcggttttttaaggtgcacaggtagggctatagagttgactcacg 180
Query: 181 gcttgagaagttgagagcacttgttgctcttgcacaggacctgggttcaagtcccagcac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 gcttgagaagttgagagcacttgttgctcttgcacaggacctgggttcaagtcccagcac 120
Query: 241 ta----ttttatctgatgccctcttctgacctctgttgtactgggcatacttatggcata 296
|| ||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 119 tagggg----atctgatgccctcttctgacctctgttatactgggcatacttatg--ata 66
Query: 297 t--gtgtatacaagcaggcaaaacatttgtactggctagttttgtgtcagcttgacac-a 353
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 65 tacgtgtatacaagcaggcaaaacatttgtactggctagttttgtgtcagcttgacacaa 6
Query: 354 gctgg 358
|||||
Sbjct: 5 gctgg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 404
Length of database: 804
Length adjustment: 9
Effective length of query: 395
Effective length of database: 795
Effective search space: 314025
Effective search space used: 314025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no462_j03.g1 MSMg01no462_j03.g1 CHROMAT_FILE:
MSMg01no462_j03.g1 PHD_FILE: MSMg01no462_j03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:36:37 2005
(437 letters)
>mm_chr7_150617122_150617958
Length = 837
Score = 803 bits (415), Expect = 0.0
Identities = 433/441 (98%), Gaps = 4/441 (0%)
Strand = Plus / Plus
Query: 1 tttctggttgtttcataagtctttatcctctcttaccatcaa----acacacacacacac 56
||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||
Sbjct: 197 tttctggttgtttcataaggctttatcctctcttaccatcaaacacacacacacacacac 256
Query: 57 acacacacacacacacacacacacacacagacagacacacagacagagaggggggaagat 116
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 257 acacacacacacacacacacacacacacacacagacacacagacagagaggggggaagat 316
Query: 117 atatagacagaggaaggggcaggcagaagcatgtgagatagagcactttctggtgaaata 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 atatagacagaggaaggggcaggcagaagcatgtgagatagagcactttctggtgaaata 376
Query: 177 gccagattgaacctcatccagtgacagttcagacttccaggtaagtatggcacccatgtc 236
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 gccagattgagcctcatccagtgacagttcagacttccaggtaagtatggcacccatgtc 436
Query: 237 tatgctaagacatcttgtgtcacagcccaggcaccctaagggtcagaggatctgccagtg 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 tatgctaagacatcttgtgtcacagcccaggcaccctaagggtcagaggatctgccagtg 496
Query: 297 gggcctggtgcagaggaacatggaaaacccacatcccataatgtagctctgaggaggcat 356
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 497 gggcctggtgcagaggaacatggagaacccacatcccataatgtagctctgaggaggcat 556
Query: 357 gactgagaagactcgaagttagaagtgatcagccaggcttgggagcaagttcacactagg 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 gactgagaagactcgaagttagaagtgatcagccaggcttgggagcaagttcacactagg 616
Query: 417 gagggttctccaaggcatgag 437
|||||||||||||||||||||
Sbjct: 617 gagggttctccaaggcatgag 637
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 54
Number of extensions: 19
Number of successful extensions: 19
Number of sequences better than 10.0: 1
Number of HSP's gapped: 13
Number of HSP's successfully gapped: 1
Length of query: 437
Length of database: 837
Length adjustment: 9
Effective length of query: 428
Effective length of database: 828
Effective search space: 354384
Effective search space used: 354384
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
