Query= MSMg01no463_c18.b1 MSMg01no463_c18.b1 CHROMAT_FILE:
MSMg01no463_c18.b1 PHD_FILE: MSMg01no463_c18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:37:28 2005
(244 letters)
>mm_chr7_115110909_115111552
Length = 644
Score = 447 bits (231), Expect = e-130
Identities = 240/243 (98%)
Strand = Plus / Minus
Query: 1 ctccaactaaaaggaaacagatcctgggagacatatgtgttgaatagagcaggggtgaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ctccaactaaaaggaaacagatcctgggagacatatgtgttgaatagagcaggggtgaac 384
Query: 61 agatggccacatagcggtcgtaagccatgacagctaggaggaagcactcaactgtcccaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 agatggccacatagcggtcgtaagccatgacagctaggaggaagcactcaactgtcccaa 324
Query: 121 atgtcagtgtgatgcagaattgaactatacaagcagctacagagagtaccagtctatttc 180
|||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 323 atgtcactgtgatgcagaattgggctatacaagcagctacagagagtaccagtctatttc 264
Query: 181 caagaaatcctttaaacattgttggtgtgattgatgtggaaaacccaatgtctacaaaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 caagaaatcctttaaacattgttggtgtgattgatgtggaaaacccaatgtctacaaaag 204
Query: 241 cca 243
|||
Sbjct: 203 cca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no463_c18.g1 MSMg01no463_c18.g1 CHROMAT_FILE:
MSMg01no463_c18.g1 PHD_FILE: MSMg01no463_c18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:37:28 2005
(248 letters)
>mm_chr7_114942417_114943062
Length = 646
Score = 443 bits (229), Expect = e-129
Identities = 242/247 (97%), Gaps = 2/247 (0%)
Strand = Plus / Plus
Query: 1 agtctcttttctttcagagctctctggtctcaaaaaaaaagagaggtactttgtagtatc 60
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 201 agtctcttttctttcagagctctctggtctcaaaaaaa--gagaggtactttgtagtatc 258
Query: 61 ccgcgacactcacactcactgtgtaccaagatgattgtttctggctttcaacccaggtag 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 ctgcgacactcacactcactgtgtaccaagatgattgtttctggctttcaacccaggtag 318
Query: 121 actgtggactccacaacaatggggataccttcctccctccctccctctctccctccctcc 180
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 319 actgtggactccacaacaatggggataccttcctccctccctccctccctccctccctcc 378
Query: 181 ctccctccctccctccctcccttccttccttccttccttccttttctttgtgagagaatt 240
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 379 ctccctccctccctccctcccttcctttcttccttccttccttttctttgtgagagaatt 438
Query: 241 tcatttc 247
|||||||
Sbjct: 439 tcatttc 445
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 8
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 646
Length adjustment: 9
Effective length of query: 239
Effective length of database: 637
Effective search space: 152243
Effective search space used: 152243
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
