Query= MSMg01no464_h13.b1 MSMg01no464_h13.b1 CHROMAT_FILE:
MSMg01no464_h13.b1 PHD_FILE: MSMg01no464_h13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:39:15 2005
(325 letters)
>mm_chr7_104407171_104407896
Length = 726
Score = 607 bits (314), Expect = e-178
Identities = 323/326 (99%), Gaps = 1/326 (0%)
Strand = Plus / Plus
Query: 1 ggctgtcctaagcactcagatattctttctcagattctttcatagaggcagttagagaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 201 ggctgtcctaagcactcagatattctttctcagattctttcatagaggcagttggagaat 260
Query: 61 tgtggtcacagaaaggtctcctgggatctcatgttgctgtctgtctctgctacctctttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtggtcacagaaaggtctcctgggatctcatgttgctgtctgtctctgctacctctttc 320
Query: 121 agcttcctctgctttgtggtgattataaacactagaaaacata-ttttaaacttggagaa 179
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 321 agcttcctctgctttgtggtgattataaacactagaaaacataattttaaacttggagaa 380
Query: 180 ttatttataatagttttaagtttgatctagcatatgtttactttctgtgaaaatatgagg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttatttataatagttttaagtttgatctagcatatgtttactttctgtgaaaatatgagg 440
Query: 240 aatgtcataaacttagggggaaaaaaaaacctccaggcagccagtaatctggtgatcaga 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aatgtcataaacttagggggaaaaaaaaacctccaggcagccagtaatctggtgatcaga 500
Query: 300 tcttatgacttcttatggataacaca 325
||||| ||||||||||||||||||||
Sbjct: 501 tcttacgacttcttatggataacaca 526
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 325
Length of database: 726
Length adjustment: 9
Effective length of query: 316
Effective length of database: 717
Effective search space: 226572
Effective search space used: 226572
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no464_h13.g1 MSMg01no464_h13.g1 CHROMAT_FILE:
MSMg01no464_h13.g1 PHD_FILE: MSMg01no464_h13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:39:15 2005
(164 letters)
>mm_chr7_104562478_104563042
Length = 565
Score = 311 bits (161), Expect = 1e-89
Identities = 164/165 (99%), Gaps = 1/165 (0%)
Strand = Plus / Minus
Query: 1 actaaaccaaccaaccaacaacc-aaaacccctggaagacagaggagaaagataagcccc 59
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 365 actaaaccaaccaaccaacaaccaaaaacccctggaagacagaggagaaagataagcccc 306
Query: 60 caaattgcttgccctgataaacctcattctttccttctgtactggttggtttcctgctcc 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 caaattgcttgccctgataaacctcattctttccttctgtactggttggtttcctgctcc 246
Query: 120 tttagaaaaatgaagcctgcagcctttggtggacatggcaagtgg 164
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 tttagaaaaatgaagcctgcagcctttggtggacatggcaagtgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 164
Length of database: 565
Length adjustment: 8
Effective length of query: 156
Effective length of database: 557
Effective search space: 86892
Effective search space used: 86892
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
