Query= MSMg01no464_l16.b1 MSMg01no464_l16.b1 CHROMAT_FILE:
MSMg01no464_l16.b1 PHD_FILE: MSMg01no464_l16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:39:36 2005
(222 letters)
>mm_chr7_112365946_112366568
Length = 623
Score = 412 bits (213), Expect = e-120
Identities = 219/221 (99%), Gaps = 1/221 (0%)
Strand = Plus / Minus
Query: 1 gcctttgatagtttatatcttttatc-aacaatgtaaaacaatctttagagtttattgtt 59
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 421 gcctttgatagtttatatcttttatcaaacaatgtaaaacaatctttagagtttattgtt 362
Query: 60 actggggaagctggataaggagtattattacaagtcccataatctattgctcactgatca 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 actggggaagctggataaggagtattattacaagtcccataatctattgctcactgatca 302
Query: 120 gtctagacttcagctttatttctttcgctcttgcttttagatcacagatcccagtcctta 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtctagacttcagctttatttctttcgctcttgcttttagatcacagatcccagtcctta 242
Query: 180 cctaagtgaggaggtcagagacaggaagcattgatgatgat 220
|||||||||||||||||||||||||||| ||||||||||||
Sbjct: 241 cctaagtgaggaggtcagagacaggaagtattgatgatgat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 222
Length of database: 623
Length adjustment: 9
Effective length of query: 213
Effective length of database: 614
Effective search space: 130782
Effective search space used: 130782
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no464_l16.g1 MSMg01no464_l16.g1 CHROMAT_FILE:
MSMg01no464_l16.g1 PHD_FILE: MSMg01no464_l16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:39:36 2005
(501 letters)
>mm_chr7_112105627_112106527
Length = 901
Score = 930 bits (481), Expect = 0.0
Identities = 496/501 (99%)
Strand = Plus / Plus
Query: 1 tattagtaattaggagattatgtattacaaccacagtgcattatatttgactcagtataa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tattagtaattaggagattatgtattacaaccacagtgcattatatttgactcagtataa 260
Query: 61 tggtaccaagcaaatgaacatccatcctctgagctcccaacaaaactaatgatgtttcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggtaccaagcaaatgaacatccatcctctgagctcccaacaaaactaatgatgtttcta 320
Query: 121 aggatgtatagtaattgttattatgatacacaattgacaaacctgtaattaggatgcaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggatgtatagtaattgttattatgatacacaattgacaaacctgtaattaggatgcaat 380
Query: 181 attagaaaactggtactttccatttatgctaaaattatatttatcacacatcgatcatgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 attagaaaactggtactttccatttatgctaaaattatatttatcacacatcgatcatgc 440
Query: 241 tctgtttagttctaaattgagtctaaatatctctaaagcaacatgtacagaagtattaaa 300
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctggggagttctaaattgagtctaaatatctctaaagcaacatgtacagaagtattaaa 500
Query: 301 aacaattttattcataacagtaaatattagataaaagtcaaatgtctatctagattggat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aacaattttattcataacagtaaatattagataaaagtcaaatgtctatctagattggat 560
Query: 361 aatttaatgtatttatttgatgtaatacaagcagtaaattactggtattttaaatcatat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aatttaatgtatttatttgatgtaatacaagcagtaaattactggtattttaaatcatat 620
Query: 421 gaataaatcacacaaacttttgtgtgaatataaatatatctcagtatatatgtataatat 480
|||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 621 gaataaatcacacaaagttttgtgtgaatataaatatatctcagtatatatatataatat 680
Query: 481 atctaatataaaagttataag 501
|||||||||||||||||||||
Sbjct: 681 atctaatataaaagttataag 701
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 501
Length of database: 901
Length adjustment: 10
Effective length of query: 491
Effective length of database: 891
Effective search space: 437481
Effective search space used: 437481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
