Query= MSMg01no465_h04.b1 MSMg01no465_h04.b1 CHROMAT_FILE:
MSMg01no465_h04.b1 PHD_FILE: MSMg01no465_h04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:40:33 2005
(332 letters)
>mm_chr7_4984089_4984820
Length = 732
Score = 634 bits (328), Expect = 0.0
Identities = 331/332 (99%)
Strand = Plus / Minus
Query: 1 tacatagagagaccatgtctcaaaaatgggggaaaatcaagcctatctgtacctacaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 tacatagagagaccatgtctcaaaaatgggggaaaatcaagcctatctgtacctacaaag 571
Query: 61 caagtccatagctagcctagactacatgagaccgtctccagtaagtctgcagactgtgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 caagtccatagctagcctagactacatgagaccgtctccagtaagtctgcagactgtgtt 511
Query: 121 aagttcctcaggtatgctctcccagcctactggagtgtgaatgtcatgtccgatcaattc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 aagttcctcaggtatgctctcccagcctactggagtgtgaatgtcatgtccgatcaattc 451
Query: 181 atcagtctccctagcgcccaggtcagggcttggcagacagaaggcttccggtgtttccat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 atcagtctccctagcgcccaggtcagggcttggcagacagaaggcttccggtgtttccat 391
Query: 241 ggtggctgatagcatcatggaagggagtctcggggtctcaaatcagttcctgagagggcg 300
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 ggtggctgagagcatcatggaagggagtctcggggtctcaaatcagttcctgagagggcg 331
Query: 301 acttccctgtttcactcaggctaatgcctggg 332
||||||||||||||||||||||||||||||||
Sbjct: 330 acttccctgtttcactcaggctaatgcctggg 299
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 332
Length of database: 732
Length adjustment: 9
Effective length of query: 323
Effective length of database: 723
Effective search space: 233529
Effective search space used: 233529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no465_h04.g1 MSMg01no465_h04.g1 CHROMAT_FILE:
MSMg01no465_h04.g1 PHD_FILE: MSMg01no465_h04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:40:33 2005
(347 letters)
>mm_chr7_4816090_4816835
Length = 746
Score = 629 bits (325), Expect = 0.0
Identities = 343/349 (98%), Gaps = 4/349 (1%)
Strand = Plus / Plus
Query: 1 aacgtgcaattctcctgctgaaacttccggaaggagtagctgggattacaaaaactgcag 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 aacgagcaattctcctgctgaaacttccggaaggagtagctgggattacaaaaactgcag 259
Query: 61 ccagccaaattctcactgtggattctttgtagccaaatacaactgcaagggaggtctcca 120
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 260 ccagccaaattctcactgtggattctttgtagccaaaaacaactgcaagggaggtctcca 319
Query: 121 acacagacatttaaaaaacaaaacaaaac-aaaacaaaaacaaaa-caaacaaaaaccca 178
||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||
Sbjct: 320 acacagacatttaaaaaacaaaacaaaacaaaaacaaaaa-aaaaccaaacaaaaaccca 378
Query: 179 caaacaaacaaacctgcaagggaggtctccaacacagataaaaagtgcgccagtgaaatg 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 caaacaaacaaacctgcaagggaggtctccaacacagataaaaagtgcgccagtgaaatg 438
Query: 239 aaaagcgcaagaacggtatggcaaactcccatctgtgctccctgaatggcaaatgtagat 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 aaaagcgcaagaacggtatggcaaactcccatctgtgctccctgaatggcaaatgtagat 498
Query: 299 tttttttttccttaaaaatttctatttatttatttagtttctatatggg 347
|||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 tttttttt-ccttaaaaatttctatttatttatttagtttctatatggg 546
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 347
Length of database: 746
Length adjustment: 9
Effective length of query: 338
Effective length of database: 737
Effective search space: 249106
Effective search space used: 249106
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
