Query= MSMg01no466_j23.b1 MSMg01no466_j23.b1 CHROMAT_FILE:
MSMg01no466_j23.b1 PHD_FILE: MSMg01no466_j23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:42:10 2005
(475 letters)
>mm_chr7_120498663_120499537
Length = 875
Score = 669 bits (346), Expect = 0.0
Identities = 358/362 (98%), Gaps = 1/362 (0%)
Strand = Plus / Minus
Query: 1 tgcatggcttcttggtttttattcaccctatttgagagtgaaatagaagaatctaagcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgcatggcttcttggtttttattcaccctatttgagagtgaaatagaagaatctaagcag 302
Query: 61 aaaatcttgtagctgaactcaggctctgttccttttctttcactgcgatttgattttgag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaaatcttgtagctgaactcaggctctgttccttttctttcactgcgatttgattttgag 242
Query: 121 atatttttctagttttaaataggcttaatttttaaaaaaaaatttatgtgtatgaatgtt 180
|| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 241 atttttttctagttttaaataggcttaattttt-taaaaaaatttatgtgtatgaatgtt 183
Query: 181 ttgcctgcatgcatgtctgtgtaacacttgggtgcctggtgacatggaagctagaaaagg 240
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ttgcctgcatgcatgtttgtgtaacacttgggtgcctggtgacatggaagctagaaaagg 123
Query: 241 acattgattccctggaactgaagttatagatgcttgtaatccattggtgacaggttggtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 acattgattccctggaactgaagttatagatgcttgtaatccattggtgacaggttggtg 63
Query: 301 ctggaatctaaccagtgttcttaaccactgagccattctccagcccgttttaaacaggct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ctggaatctaaccagtgttcttaaccactgagccattctccagcccgttttaaacaggct 3
Query: 361 ct 362
||
Sbjct: 2 ct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 475
Length of database: 875
Length adjustment: 10
Effective length of query: 465
Effective length of database: 865
Effective search space: 402225
Effective search space used: 402225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no466_j23.g1 MSMg01no466_j23.g1 CHROMAT_FILE:
MSMg01no466_j23.g1 PHD_FILE: MSMg01no466_j23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:42:10 2005
(393 letters)
>mm_chr7_120305324_120306116
Length = 793
Score = 737 bits (381), Expect = 0.0
Identities = 390/393 (99%)
Strand = Plus / Plus
Query: 1 ctatcctgaaactcactagctgggtgaccctggacagcttcaagtatctcctctgtcctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctatcctgaaactcactagctgggtgaccctggacagcttcaagtatctcctctgtcctg 260
Query: 61 tatcctcctctgtaaaatgtgaatggccataataaagtgtatgccttgaagacgccggga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tatcctcctctgtaaaatgtgaatggccataataaagtgtatgccttgaagacgccggga 320
Query: 121 agattgggaagggtagtgttgcaaaggcaccaagcgtgctcagtatacaaatgatcatgt 180
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agattgggaagggtagtgtcgcaaaggcaccaagcgtgctcagtatacaaatgatcatgt 380
Query: 181 gcttcctctagttagtgacgccccagtgagaggcaaggagccacagagagatgagagcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcttcctctagttagtgacgccccagtgagaggcaaggagccacagagagatgagagcct 440
Query: 241 cggttagggccagccagaattttctaagaagatacacgaaggctgggactacagacacag 300
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cggcaagggccagccagaattttctaagaagatacacgaaggctgggactacagacacag 500
Query: 301 gctagtcagtgaggggacactaccagagaaactagacatgagagatagcggccaaagact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gctagtcagtgaggggacactaccagagaaactagacatgagagatagcggccaaagact 560
Query: 361 tggcatgagaggggccaagtgcaaggaatgtgg 393
|||||||||||||||||||||||||||||||||
Sbjct: 561 tggcatgagaggggccaagtgcaaggaatgtgg 593
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 393
Length of database: 793
Length adjustment: 9
Effective length of query: 384
Effective length of database: 784
Effective search space: 301056
Effective search space used: 301056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
