Query= MSMg01no466_m24.b1 MSMg01no466_m24.b1 CHROMAT_FILE:
MSMg01no466_m24.b1 PHD_FILE: MSMg01no466_m24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:42:27 2005
(119 letters)
>mm_chr7_149654979_149655497
Length = 519
Score = 230 bits (119), Expect = 2e-65
Identities = 119/119 (100%)
Strand = Plus / Plus
Query: 1 agtagaggaatggctggggcaggggaagcgtagataataactgggctggaggctgatttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtagaggaatggctggggcaggggaagcgtagataataactgggctggaggctgatttc 260
Query: 61 ctatagtgttattgacttgcttggatgaccatgcatacagtgcaacacacaaagatgtg 119
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctatagtgttattgacttgcttggatgaccatgcatacagtgcaacacacaaagatgtg 319
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 119
Length of database: 519
Length adjustment: 8
Effective length of query: 111
Effective length of database: 511
Effective search space: 56721
Effective search space used: 56721
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no466_m24.g1 MSMg01no466_m24.g1 CHROMAT_FILE:
MSMg01no466_m24.g1 PHD_FILE: MSMg01no466_m24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:42:27 2005
(282 letters)
>mm_chr7_149852066_149852748
Length = 683
Score = 532 bits (275), Expect = e-155
Identities = 281/283 (99%), Gaps = 1/283 (0%)
Strand = Plus / Minus
Query: 1 cacccctcttccaggctatcatgctcatgccagaaagaagccaagaatcttctttcaaat 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 cacccctcttccaggatatcatgctcatgccagaaagaagccaagaatcttctttcaaat 424
Query: 61 gttggttcagacactaaaacaattacatagtggtatggcttcagtctatccagacccagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 gttggttcagacactaaaacaattacatagtggtatggcttcagtctatccagacccagg 364
Query: 121 acactggccttccctgctgacccctctccagtg-ccccacagcaacccttacttactttt 179
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 363 acactggccttccctgctgacccctctccagtgcccccacagcaacccttacttactttt 304
Query: 180 ggtgtgggttgtgttgatcagtttggtgcaatcctcatgttggtggttcaggtagtgact 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 ggtgtgggttgtgttgatcagtttggtgcaatcctcatgttggtggttcaggtagtgact 244
Query: 240 tcttcccaggcttgcagattggcatagagcattgcttgggtct 282
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 tcttcccaggcttgcagattggcatagagcattgcttgggtct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 683
Length adjustment: 9
Effective length of query: 273
Effective length of database: 674
Effective search space: 184002
Effective search space used: 184002
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
