Query= MSMg01no468_p02.b1 MSMg01no468_p02.b1 CHROMAT_FILE:
MSMg01no468_p02.b1 PHD_FILE: MSMg01no468_p02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:45:20 2005
(169 letters)
>mm_chr7_120160230_120160799
Length = 570
Score = 269 bits (139), Expect = 7e-77
Identities = 164/173 (94%), Gaps = 5/173 (2%)
Strand = Plus / Minus
Query: 1 accttaa--atcaagtttatccaaaaatctatgcataaaac-tattttactctacattat 57
||||||| ||||||||||||| |||||| ||||||||||| || |||| |||| |||||
Sbjct: 379 accttaaacatcaagtttatcc-aaaatcgatgcataaaacataatttagtctatattat 321
Query: 58 gt-atatatgcatgtatacctatgagaacttcggacacctgtggcttcaaccttaaggct 116
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gtaatatatgcatgtatacctatgagaacttcggacacctgtggcttcaaccttaaggct 261
Query: 117 tattggtcaaatgtttgggtcatttcatactgccagcttcgatgtcctggagc 169
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tattggtcaaatgtttgggtcatttcatactgccagcttcgatgtcctggagc 208
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 169
Length of database: 570
Length adjustment: 8
Effective length of query: 161
Effective length of database: 562
Effective search space: 90482
Effective search space used: 90482
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no468_p02.g1 MSMg01no468_p02.g1 CHROMAT_FILE:
MSMg01no468_p02.g1 PHD_FILE: MSMg01no468_p02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:45:21 2005
(245 letters)
>mm_chr7_120023940_120024584
Length = 645
Score = 458 bits (237), Expect = e-133
Identities = 243/245 (99%)
Strand = Plus / Plus
Query: 1 taaattacaacagagaccccatgcccaactgctctcccgtttgtctctttctcaaatcag 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 201 taaattacaacagagaccccatgcccaactgctctcccgtttgcctctttctcaaatcag 260
Query: 61 gaggactcttaatttgctcatttgattgctgttgaaattccattttcagagcatctaacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaggactcttaatttgctcatttgattgctgttgaaattccattttcagagcatctaacc 320
Query: 121 tgggttcattcagtaaggcaagacaacctgaggtgttttctatggaaagaaatatctgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgggttcattcagtaaggcaagacaacctgaggtgttttctatggaaagaaatatctgtg 380
Query: 181 ctgtgatttcatggactcacaaacaaagcaaatggcacaacacagaacaccagtgtggac 240
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 381 ctgtgatttcatggactcacaaacaaagcaaatggcagaacacagaacaccagtgtggac 440
Query: 241 acctc 245
|||||
Sbjct: 441 acctc 445
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
