Query= MSMg01no468_p22.b1 MSMg01no468_p22.b1 CHROMAT_FILE:
MSMg01no468_p22.b1 PHD_FILE: MSMg01no468_p22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:45:25 2005
(463 letters)
>mm_chr7_120883874_120884736
Length = 863
Score = 841 bits (435), Expect = 0.0
Identities = 456/463 (98%)
Strand = Plus / Plus
Query: 1 aagcacatgcttgcatgcctttctacccacctgtttgcagatttgagggggacagagacc 60
||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 201 aagcacatgcttgcatgcctttctacccacctgattgcagatttaagggggacagagacc 260
Query: 61 acatgtcagtctcctgatatttccaaagtctggcacagaatccagactacagtacacgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acatgtcagtctcctgatatttccaaagtctggcacagaatccagactacagtacacgct 320
Query: 121 gaaagaaaagaaaaatgactaagtagaattttatgagtatacacaaccttttaacctggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaaagaaaagaaaaatgactaagtagaattttatgagtatacacaaccttttaacctggg 380
Query: 181 cttctgcttaatttaattatcacattaagccttttatgaacctgcttaaacaggtgagga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttctgcttaatttaattatcacattaagccttttatgaacctgcttaaacaggtgagga 440
Query: 241 gactggggttcttagaggaagtgcaacctggccaaggtcatttggctgaggaagccaaaa 300
||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaccggggttcagagaggaagtgcaacctggccaaggtcatttggctgaggaagccaaaa 500
Query: 301 ttgaattaccggttaaacatctaatgggtgattaagactcacataaaaatcaatcaacct 360
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttgaattacaggttaaacatctaatgggtgattaagactcacataaaaatcaatcaacct 560
Query: 361 attatcacattaagacgctaactagaatgactggaaggaaatgcctgggaatgtcagtag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 attatcacattaagacgctaactagaatgactggaaggaaatgcctgggaatgtcagtag 620
Query: 421 catcagagagcttacattaattgccttcgagcccacagtaccg 463
||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 621 catcagagagcttacattaattgccttcgggcccacagtaccg 663
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 463
Length of database: 863
Length adjustment: 10
Effective length of query: 453
Effective length of database: 853
Effective search space: 386409
Effective search space used: 386409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no468_p22.g1 MSMg01no468_p22.g1 CHROMAT_FILE:
MSMg01no468_p22.g1 PHD_FILE: MSMg01no468_p22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:45:25 2005
(509 letters)
>mm_chr7_121034118_121035021
Length = 904
Score = 866 bits (448), Expect = 0.0
Identities = 492/510 (96%), Gaps = 7/510 (1%)
Strand = Plus / Minus
Query: 1 cagtttccagatgtctagcggagattttgatagtaccagaggaggaatgcctgaagctat 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 cagtttccagatgtctagcagagattttgatagtaccagaggaggaatgcctgaagctat 528
Query: 61 ttggtccattctccactggcctctgtctctgtttcaccatatctagcccttcccaagaga 120
|||||||||||||||||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 527 ttggtccattctccactggc------ctctgtttcaccatatctaacccttcccaagaga 474
Query: 121 gaggaatacagacttctcctaaggagagagccccagaagcagcattgggaacaaagcact 180
||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 gaggaatgcagacttctcccaaggagagagccccagaagcagcattgggaacaaagcact 414
Query: 181 ttgtacaatggttgaaaagagacacctgcagacacagtttatgatatctgaagatgcagg 240
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 413 ttgtacaatggttgaaaagagacacctgcagacacagtttatgatgtctgaagatgcagg 354
Query: 241 gtggctgactttctgtgcgtggcgactgactgggcatggtactattcagt-ccccatgta 299
|||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 353 gtggctgactgactgtgcgtggcgactgactgggcatggtactattcagtcccccatgta 294
Query: 300 gcagtccttgtgattcctcaaaggtaagttactcaccttttactttacttcaactgaggg 359
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 gcagtccttgtgactcctcaaaggtaagttactcaccttttactttacttcaactgaggg 234
Query: 360 ttgaacacccaagtttgttttcttaccccactgcagaggtgaccaaaatgtgacccacag 419
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 233 ttgaacacccaagtttgttttcttaccccactgcagaggttaccaaaatgtgacccacag 174
Query: 420 actcctgggggccctgagatcctttcagagaatctgagagactgaaactatttcataaca 479
||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 actcctgggagctctgagatcctttcagagaatctgagagactgaaactatttcataaca 114
Query: 480 acgtgaagacatcatttgctggctgtagtg 509
||||||||||||||||||||||||||||||
Sbjct: 113 acgtgaagacatcatttgctggctgtagtg 84
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 509
Length of database: 904
Length adjustment: 10
Effective length of query: 499
Effective length of database: 894
Effective search space: 446106
Effective search space used: 446106
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
