Query= MSMg01no469_a16.b1 MSMg01no469_a16.b1 CHROMAT_FILE:
MSMg01no469_a16.b1 PHD_FILE: MSMg01no469_a16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:45:28 2005
(544 letters)
>mm_chr7_137279441_137280384
Length = 944
Score = 884 bits (457), Expect = 0.0
Identities = 516/539 (95%), Gaps = 8/539 (1%)
Strand = Plus / Plus
Query: 8 gaattcctatttacaggaacacacatacacacacacacacacacacacacacacacgtag 67
||||||||| | |||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 212 gaattcctaatcacaggaacac----acacacacacacacacacacacacacacacgtag 267
Query: 68 cctggacaagaagaactggggcaccctctagatcctcactgagaatataagaagccatgg 127
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 268 cctggacaagaagagctggggcaccctctagatcctcactgagaatataagaagccacgg 327
Query: 128 gaagtgacatccattgttcttgtttcatcttggcctagaccccagccctgtgctgctgct 187
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 328 gaagtgacatccattgttcttgtttcatcttggcctagaccccagccccgtgctgctgct 387
Query: 188 gaagatgggcaaagcaatatgccctcattgaacaaagccatctatcattcaagagtcctc 247
|||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 388 gaagatgggcaaagcaatatgccctcattgaacaaagccaactgtcattcaagagtcctc 447
Query: 248 tagaaattagtcacacccccaggaagctagcaccacaaccctagctttcaccacggcagc 307
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 448 tagaaattagtcacacccccaggaagctagcaccacaaccctagctttcaccaaggcagc 507
Query: 308 ccctgggatgctaaggttgatgggagaaatactgtgtgtcaggagaatggtgtgtaagtg 367
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 508 ccctgggatgctaaggttgatgggagaaacactgtgtgtcaggagaatggtgtgtaagtg 567
Query: 368 gaaccaggtttcagagtggaacagtttgcagtgtggcggcccactcagaacactggtctg 427
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 568 gaaccaggtttcagagtggaacagtttgcagtgtggcagcccactcagaacactggtctg 627
Query: 428 gaagcttgcattgaccctcaagccacacaggatccctgatcatgcatgacccagcttgac 487
|||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 628 gaagtttgcattgaccctcaagccacacagaatccctgatcatgcatgacccagcttgac 687
Query: 488 cttagccttgggggcttcattttattttatttttt---tatttt-tattcatttttttt 542
|||||||||||||| |||||||||||||||||||| |||||| | || |||||||||
Sbjct: 688 cttagccttgggggtttcattttattttattttttatttattttatttttatttttttt 746
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 46
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 544
Length of database: 944
Length adjustment: 10
Effective length of query: 534
Effective length of database: 934
Effective search space: 498756
Effective search space used: 498756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no469_a16.g1 MSMg01no469_a16.g1 CHROMAT_FILE:
MSMg01no469_a16.g1 PHD_FILE: MSMg01no469_a16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:45:28 2005
(180 letters)
>mm_chr7_137487132_137487711
Length = 580
Score = 310 bits (160), Expect = 5e-89
Identities = 172/176 (97%)
Strand = Plus / Minus
Query: 1 aactaactaaagcagatggccacaataaaagctgtgcgtgtcaggctagtctggcgcagg 60
||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||
Sbjct: 376 aactaactaaagcagatggccacaataaaagctgtgcatgtcaggttagtctggggcagg 317
Query: 61 gttaggatatgacttgccttgaaggacatttaaggctgactggggatttgctaccacata 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 316 gttaggatatgacttgccttgaaggacatttaaggctgactggggatttgctaccacaga 257
Query: 121 agctaagctaaataccaagccttgccgtggcaatttgcatttccacaatgaatttg 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 agctaagctaaataccaagccttgccgtggcaatttgcatttccacaatgaatttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 180
Length of database: 580
Length adjustment: 8
Effective length of query: 172
Effective length of database: 572
Effective search space: 98384
Effective search space used: 98384
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
