Query= MSMg01no471_c24.b1 MSMg01no471_c24.b1 CHROMAT_FILE:
MSMg01no471_c24.b1 PHD_FILE: MSMg01no471_c24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:48:21 2005
(314 letters)
>mm_chr7_138629101_138629813
Length = 713
Score = 511 bits (264), Expect = e-149
Identities = 294/304 (96%), Gaps = 1/304 (0%)
Strand = Plus / Minus
Query: 9 tctcttgatatttcacaggtaatcgctgccccataacctcagaatcatcgcacgttagat 68
|||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 689 tctcttgatacaacacaggtaatcgctgccctgtaacctcacaatcatcgcacgttagat 630
Query: 69 tttgaattaatttttagttattgtgctatcagaaactctttcctgctgtcagatttctca 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 tttgaattaatttttagttattgtgctatcagaaactctttcctgctgtcagatttctca 570
Query: 129 ttccaccttcagttctgtggttccacagagaaccgtgactcccagtctgagaagctgtag 188
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 569 ttccaccttcagttctgtggttccatagagaaccgtgactcccagtctgagaagctgtag 510
Query: 189 agcagctatgcagagtggagtgtccagtctgagagtggtttgacttactaatgaaaggcc 248
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 509 agcagctatgcagagtggagtgtccagtctgagagtggtttgacctactaatgaaaggcc 450
Query: 249 cacaggggtggaagagctgaggctgttctgagagcgctgggggtgaggggtgggggtagg 308
||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 449 cacagggatggaagagctgaggctgttctgagagcgctgggggtgaggggt-ggggtagg 391
Query: 309 gggt 312
||||
Sbjct: 390 gggt 387
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 713
Length adjustment: 9
Effective length of query: 305
Effective length of database: 704
Effective search space: 214720
Effective search space used: 214720
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no471_c24.g1 MSMg01no471_c24.g1 CHROMAT_FILE:
MSMg01no471_c24.g1 PHD_FILE: MSMg01no471_c24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:48:21 2005
(569 letters)
>mm_chr7_138506233_138507201
Length = 969
Score = 1038 bits (537), Expect = 0.0
Identities = 561/569 (98%)
Strand = Plus / Plus
Query: 1 ctccgctcctggggcaggtgccgcgcgcatgcgcagtactctgcgcgcgggaacccaggg 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 201 ctccgctcctggggcaggtgccgcgcgcatgcgcagtgctctgcgcgcgggaacccaggg 260
Query: 61 gtttatttccacgttggcaaagcagcgacgctttggggtgggagatggggtggcgcctgg 120
|||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||
Sbjct: 261 gtttatttccacgttggcaaagcagcgacgctttagggtgggaggtggggtggcgcctgg 320
Query: 121 gcggtgtgggcaccctgagggtggtaccaaagcagataggtgcggtctccttggctcaag 180
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcggtgtcggcaccctgagggtggtaccaaagcagataggtgcggtctccttggctcaag 380
Query: 181 cagcctgtaaagccagctcccaatccgaggtcctcggaagaggactccggggacccttcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagcctgtaaagccagctcccaatccgaggtcctcggaagaggactccggggacccttcc 440
Query: 241 tgcgccagcctgtggagtgaaggccatgcaggctgcttttgaagcagtgcgaccacagct 300
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 441 tgcgccagcccgtggagtgaaggccatgcaggctgcttttgaagcagtgcgaccacggct 500
Query: 301 gatcgcgttgtttcactgctcaggtcacctccgtgggctgtagagtggagcgcggcgctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gatcgcgttgtttcactgctcaggtcacctccgtgggctgtagagtggagcgcggcgctt 560
Query: 361 agcattgcagaatactgctgagtggccgaaggcactaaacactgaacccactaagacccg 420
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agcattgcagaataatgctgagtggccgaaggcactaaacactgaacccactaagacccg 620
Query: 421 gcttccgagcctcaggaacccggtggagcgtgcttgcacgtcctaaatgacagaattctc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gcttccgagcctcaggaacccggtggagcgtgcttgcacgtcctaaatgacagaattctc 680
Query: 481 aaggttaaaaatgtccaggaggctcaaagctgcgacttaaggtttctcactcataacctt 540
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aaggttaaaaatgtccaagaggctcaaagctgcgacttaaggtttctcactcataacctt 740
Query: 541 gacaaaaactggcaatgggccttggtccc 569
|||||||||||||||||||||||||||||
Sbjct: 741 gacaaaaactggcaatgggccttggtccc 769
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 569
Length of database: 969
Length adjustment: 10
Effective length of query: 559
Effective length of database: 959
Effective search space: 536081
Effective search space used: 536081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
