Query= MSMg01no471_i07.b1 MSMg01no471_i07.b1 CHROMAT_FILE:
MSMg01no471_i07.b1 PHD_FILE: MSMg01no471_i07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:48:47 2005
(407 letters)
>mm_chr7_114370199_114371005
Length = 807
Score = 787 bits (407), Expect = 0.0
Identities = 407/407 (100%)
Strand = Plus / Plus
Query: 1 cctgtaaattttcaccacagtactattttgagattgagtagcaatgcctaatgattttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctgtaaattttcaccacagtactattttgagattgagtagcaatgcctaatgattttca 260
Query: 61 gcatagtgagtgcgtgagagccgaacctatatcctgtatatcttgctattctcactctac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcatagtgagtgcgtgagagccgaacctatatcctgtatatcttgctattctcactctac 320
Query: 121 tttggcccttgtgcttttgttactgctcagtataatttaagccaacaaataacaattatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttggcccttgtgcttttgttactgctcagtataatttaagccaacaaataacaattatg 380
Query: 181 caatatgtattaaatagttttgagtggaaaaatttgaacttcagttacttaaagtttcac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caatatgtattaaatagttttgagtggaaaaatttgaacttcagttacttaaagtttcac 440
Query: 241 taaagaaataaaattttgcataggaaataaacagccaagaatttcaagggaattcttcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taaagaaataaaattttgcataggaaataaacagccaagaatttcaagggaattcttcaa 500
Query: 301 ttcctcttctattaaaatcttactttttgagcttgggatgtagttcagtaagtagacacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttcctcttctattaaaatcttactttttgagcttgggatgtagttcagtaagtagacacc 560
Query: 361 ctgggtttgatcaccagcacctccatgaaacagaatgtgatggtaca 407
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctgggtttgatcaccagcacctccatgaaacagaatgtgatggtaca 607
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 407
Length of database: 807
Length adjustment: 9
Effective length of query: 398
Effective length of database: 798
Effective search space: 317604
Effective search space used: 317604
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no471_i07.g1 MSMg01no471_i07.g1 CHROMAT_FILE:
MSMg01no471_i07.g1 PHD_FILE: MSMg01no471_i07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:48:47 2005
(489 letters)
>mm_chr7_114563434_114564322
Length = 889
Score = 888 bits (459), Expect = 0.0
Identities = 484/497 (97%), Gaps = 8/497 (1%)
Strand = Plus / Minus
Query: 1 ctggcatgggtatgacatttgataatgatgaggtgcatctgcagccacttgctgtgcaaa 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 852 ctggcacgggtatgacatttgataatgatgaggtgcatctgcagccacttgctgtgcaaa 793
Query: 61 ccttgacttatgtcagggtaggctgtggcctataaactgtggagggtgctaaagtcttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792 ccttgacttatgtcagggtaggctgtggcctataaactgtggagggtgctaaagtcttct 733
Query: 121 aggttttgtgtgtgtga--------gtgtgtgtgtgtgtgtgtttacagtcattacgaac 172
||||||||||||||||| |||||||||||||||||||||||||||||| ||||
Sbjct: 732 aggttttgtgtgtgtgaatgtgtgtgtgtgtgtgtgtgtgtgtttacagtcattatgaac 673
Query: 173 agcaagagtaaacttttcatatttacacaaagacaccaggtgagttaacagtacttcaga 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 agcaagagtaaacttttcatatttacacaaagacaccaggtgagttaacagtacttcaga 613
Query: 233 acacctgccagtatgccagagagcaacagtggcctgtgtgacctcaccagcctccagtgt 292
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 acacctgccaggatgccagagagcaacagtggcctgtgtgacctcaccagcctccagtgt 553
Query: 293 aaccatctgaatgtccattaccaatagctcaacgtgtcctctagacaccatgtgggtgct 352
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 552 aaccatctgaatgtccattaccaatagctcaacgtgtcctctagacaccgtgtgggtgct 493
Query: 353 tttttaccaaaaagaagtatcttacaaagaagactctccatgttcactcccatctcctta 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 tttttaccaaaaagaagtatcttacaaagaagactctccatgttcactcccatctcctta 433
Query: 413 gaatttgacctcagcaaagggctgtggggatggatgagtcagcctagaactgcagaatat 472
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 gaacttgacctcagcaaagggctgtggggatggatgagtcagcctagaactgcagaatat 373
Query: 473 ttttaaagaggtaattc 489
|||||||||||||||||
Sbjct: 372 ttttaaagaggtaattc 356
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 489
Length of database: 889
Length adjustment: 10
Effective length of query: 479
Effective length of database: 879
Effective search space: 421041
Effective search space used: 421041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|