Query= MSMg01no473_h15.b1 MSMg01no473_h15.b1 CHROMAT_FILE:
MSMg01no473_h15.b1 PHD_FILE: MSMg01no473_h15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:51:34 2005
(575 letters)
>mm_chr7_136091345_136092319
Length = 975
Score = 1029 bits (532), Expect = 0.0
Identities = 564/579 (97%), Gaps = 8/579 (1%)
Strand = Plus / Plus
Query: 1 gaccctaagggncaacaggctacaaaattttcaaaggcctttagactaggaagatgtaag 60
||||||||||| ||||||||||||| | |||||||||||||||||| |||||||||||||
Sbjct: 201 gaccctaagggtcaacaggctacaagactttcaaaggcctttagacaaggaagatgtaag 260
Query: 61 gtctgggtctggaatagtaacagcttcagtgaattgagagtttaataggtaaagcataga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 261 gtctgggtctggaatagtaacagcttcagtgaattgagagtttaataggtaaagcgtaga 320
Query: 121 ctcctcttgatgctgctaattaattaaccattggtttgttcagtgaacttaggtattgca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctcctcttgatgctgctaattaattaaccattggtttgttcagtgaacttaggtattgca 380
Query: 181 gagtcaagatttccttctgaataaacccagataaatcttgctcatcctgcccctaattta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gagtcaagatttccttctgaataaacccagataaatcttgctcatcctgcccctaattta 440
Query: 241 tataacg----tttttttctttgggactgccctagctttgaatagtgacatggagactta 296
||||||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tataacgggacttt----ctttgggactgccctagctttgaatagtgacatggagactta 496
Query: 297 tatttatttaaaatagctttaggcctttggttactctagttcccaactagctcttataat 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 tatttatttaaaatagctttaggcctttggttactctagttcccaactagctcttataat 556
Query: 357 ttatattaatccattaatttataattataatttatgttaacccatttatattattctgtg 416
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 557 ttatattaatccattaatttataattataatttgtgttaacccatttatattattctgtg 616
Query: 417 tctgctcattacctctcagtttctagtactaggcctccttcttcctctgtgtcctgctgg 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 tctgctcattacctctcagtttctagtactaggcctccttcttcctctgtgtcctgctgg 676
Query: 477 caattttaccccgcctgactctttcccggagttcctatctctgcctcacttcctttcctg 536
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 677 caattttaccccgcctgactttttcccggagttcctatctctgcctcacttcctttcctg 736
Query: 537 cttttgctataggccatcagctttttattgaaagcaatc 575
|||||||||||||||||||||||||||||||||||||||
Sbjct: 737 cttttgctataggccatcagctttttattgaaagcaatc 775
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 575
Length of database: 975
Length adjustment: 10
Effective length of query: 565
Effective length of database: 965
Effective search space: 545225
Effective search space used: 545225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no473_h15.g1 MSMg01no473_h15.g1 CHROMAT_FILE:
MSMg01no473_h15.g1 PHD_FILE: MSMg01no473_h15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:51:34 2005
(430 letters)
>mm_chr7_136256354_136257183
Length = 830
Score = 613 bits (317), Expect = e-180
Identities = 332/337 (98%), Gaps = 2/337 (0%)
Strand = Plus / Minus
Query: 95 catgtttctctttttcagatttttctttaaaataaaggtagcttactaataatattaatt 154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 catgtttctctttttcagatttttctttaaaataaaggtagcttactaataatattaatt 520
Query: 155 aatatgctcttttctttcctatggatatttattttaaaaagttttttctcatgcattata 214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 aatatgctcttttctttcctatggatatttattttaaaaagttttttctcatgcattata 460
Query: 215 ttttcatcattgttttctctcccccagttcttcccagatcctctccacctttccacctgc 274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 ttttcatcattgttttctctcccccagttcttcccagatcctctccacctttccacctgc 400
Query: 275 tcaactccatgtcctttctttctctctctctctctttaaaaatcaaacagccaaaaaata 334
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 399 tcaactccatgtcctttctttctctctatctctctttaaaaatcaaacagccaaaaaata 340
Query: 335 atttaaaaagaaaatacaaagctgggcgtggtggcgcacgcctttgatcccagcact-gg 393
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 339 atttaaaaagaaaatacaaagctgggcatggtggcgcacgcctttgatcccagcactcgg 280
Query: 394 tgaggcagaggcaggcagatttctgagttcgaggcca 430
||||||||||||||| ||||||||||||||||||||
Sbjct: 279 -gaggcagaggcaggcggatttctgagttcgaggcca 244
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 430
Length of database: 830
Length adjustment: 9
Effective length of query: 421
Effective length of database: 821
Effective search space: 345641
Effective search space used: 345641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
