Query= MSMg01no473_i01.b1 MSMg01no473_i01.b1 CHROMAT_FILE:
MSMg01no473_i01.b1 PHD_FILE: MSMg01no473_i01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:51:36 2005
(664 letters)
>mm_chr7_97824233_97825296
Length = 1064
Score = 1237 bits (640), Expect = 0.0
Identities = 654/660 (99%), Gaps = 4/660 (0%)
Strand = Plus / Plus
Query: 7 gaattctttgcatctttcc--tcttcatacaacactcatggtactattttcattctttta 64
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattctttgcatct--cccatcttcatacaacactcatggtactattttcattctttta 264
Query: 65 gctcccaattattttacagatgtttatattataacctatattaaggtgtctatgagagga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gctcccaattattttacagatgtttatattataacctatattaaggtgtctatgagagga 324
Query: 125 ctctgcattccaaccctgtaaatgaccttttctggtagctcatggctttttgtttgcggc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ctctgcattccaaccctgtaaatgaccttttctggtagctcatggctttttgtttgcggc 384
Query: 185 gcctgtggaatatgtgagaaattctaagaatgtagcttgagagcttttttcttcctccat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gcctgtggaatatgtgagaaattctaagaatgtagcttgagagcttttttcttcctccat 444
Query: 245 ctgggtcatgggttttaatgggcctaaagaataaaacataattgaacactcacatgctat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctgggtcatgggttttaatgggcctaaagaataaaacataattgaacactcacatgctat 504
Query: 305 gtgatcattttcccacaaccaacactgaccaagtctgaatttgaagtgaatgtgaaatca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gtgatcattttcccacaaccaacactgaccaagtctgaatttgaagtgaatgtgaaatca 564
Query: 365 cagtagctatttagatgagcacaaaatttaggaaacaagctcccctgatgttaagatgca 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cagtagctatttagatgagcacaaaatttaggaaacaagctcccctgatgttaagatgca 624
Query: 425 attaataaaaattttaaaactataatactgagagttaggacatatacatagtgctgaact 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 attaataaaaattttaaaactataatactgagagttaggacatatacatagtgctgaact 684
Query: 485 gcaaggaaatgtgttatttcgtgcaaatggtggctttttgcttcaggagtagcaccctga 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gcaaggaaatgtgttatttcgtgcaaatggtggctttttgcttcaggagtagcaccctga 744
Query: 545 ctacccttggaaggctgcaggccaattacttcttccttaatgatttccaaatcacttaga 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ctacccttggaaggctgcaggccaattacttcttccttaatgatttccaaatcacttaga 804
Query: 605 aattgctttcaatttcctttccctgcacactttatttttgaggtctttttacttttgtaa 664
||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 805 aattgctttcaatttcctttccctgcacactttatttttgatgtctttttatttttgtaa 864
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1064
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1054
Effective search space: 689316
Effective search space used: 689316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no473_i01.g1 MSMg01no473_i01.g1 CHROMAT_FILE:
MSMg01no473_i01.g1 PHD_FILE: MSMg01no473_i01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:51:36 2005
(515 letters)
>mm_chr7_97969748_97970662
Length = 915
Score = 876 bits (453), Expect = 0.0
Identities = 465/469 (99%)
Strand = Plus / Minus
Query: 1 tttgtaaacagactcataatatgagtctgatgaaagatgtatctatttttagaagctgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 tttgtaaacagactcataatatgagtctgatgaaagatgtatctatttttagaagctgct 410
Query: 61 tggccttgtttgatgctgtaagttcaaaccaccgaccagctcagtcttttatagtaactt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 tggccttgtttgatgctgtaagttcaaaccaccgaccagctcagtcttttatagtaactt 350
Query: 121 atatgtgcttaatcatttctttactgatggttactgaccaaaaagaaatttaagacataa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 atatgtgcttaatcatttctttactgatggttactgaccaaaaagaaatttaagacataa 290
Query: 181 atgtttaccaaatccaatgaaaaatatattcttcttcagtactttcatttcttttgtgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 atgtttaccaaatccaatgaaaaatatattcttcttcagtactttcatttcttttgtgga 230
Query: 241 accactataacggtttaaaatattctgtgtgctgaggctcagaatgtgccatcctaaaat 300
|||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 accactgtaacggaagaaaatattctgtgtgctgaggctcagaatgtgccatcctaaaat 170
Query: 301 atgtcttgttgacataaggattattttgagctaaaggcaattgagaaaaagaagatgaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 atgtcttgttgacataaggattattttgagctaaaggcaattgagaaaaagaagatgaaa 110
Query: 361 ggcaagtgttctgccctcatcctatcgacagggaaaaaatcaggatgattgaagtcaatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 ggcaagtgttctgccctcatcctatcgacagggaaaaaatcaggatgattgaagtcaatt 50
Query: 421 ctagactcttagcccagagatacatcagaagaatgtatgtgacaaacct 469
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49 ctagactcttagcccagagatacatcagaagaatgtatgtgacaaacct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 515
Length of database: 915
Length adjustment: 10
Effective length of query: 505
Effective length of database: 905
Effective search space: 457025
Effective search space used: 457025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
