Query= MSMg01no475_b13.b1 MSMg01no475_b13.b1 CHROMAT_FILE:
MSMg01no475_b13.b1 PHD_FILE: MSMg01no475_b13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:53:45 2005
(569 letters)
>mm_chr7_79492372_79493347
Length = 976
Score = 998 bits (516), Expect = 0.0
Identities = 559/580 (96%), Gaps = 15/580 (2%)
Strand = Plus / Minus
Query: 1 tttctcagaag-atcacctgtattc--tttttttctctagggatcttttaggtcaagcca 57
||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 776 tttctcagaagaatcacctgtattctttttttttctctagggatcttttaggtcaagcca 717
Query: 58 ctccactcatctgtcctccctttgccctctttcttcatttcagtctttgattttatacat 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 ctccactcatctgtcctccctttgccctctttcttcatttcagtctttgattttatacat 657
Query: 118 accgggctttggctgtatt----tctgagtaactttggcattttcacttcaattcagctt 173
|| |||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 656 actgggctttggctgtatttctatctgagtaactttggcattttcacttcaattcagctt 597
Query: 174 acaagcaagtgcaataccatgggctaactttgccctgggttttggaaaaattagattatt 233
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 596 acaagcaagtgcaataccatgggctaactttgccctgggttttgggaaaattagattatt 537
Query: 234 ttttttcctgcct----attttgagtgaactgagtttgggtttactgccttgttcctatc 289
||||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 536 ttttttcctgcctaccaa----gagtgaactgagtttgggtttactgccttgttcctatc 481
Query: 290 atttgtagaactcacttgtccctggcatagctattgactattggtggaaattctggctta 349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 atttgtagaactcacttgtccctggcatagctattgactattggtggaaattctggctta 421
Query: 350 ctgtgccaggggaggagcaggcatgaaagtgaattatctgttgatacacctgcgtgagcc 409
||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 420 ctgtgccagaggaggagcaggcatgaaagtgaattatctgttgatacacctgtgtgagcc 361
Query: 410 tttgacacaagcttgggcccagtctctaccatatccacatgctggtgtttctctaagtta 469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 tttgacacaagcttgggcccagtctctaccatatccacatgctggtgtttctctaagtta 301
Query: 470 aagggacacagatttcatggaagcaactcagtgcctgaggtcatgtggtttcaattcatg 529
|||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 300 aagggacacagacttcatggaagcaactcagtgcctgaggtcgtgtggtttcaattcatg 241
Query: 530 gagggcacatagaagctctgatgatcttctacaaaggaga 569
||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 gagggcacatagaagctctgatgatcttctacaaaggaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 569
Length of database: 976
Length adjustment: 10
Effective length of query: 559
Effective length of database: 966
Effective search space: 539994
Effective search space used: 539994
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no475_b13.g1 MSMg01no475_b13.g1 CHROMAT_FILE:
MSMg01no475_b13.g1 PHD_FILE: MSMg01no475_b13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:53:46 2005
(240 letters)
>mm_chr7_79333656_79334295
Length = 640
Score = 441 bits (228), Expect = e-128
Identities = 237/240 (98%)
Strand = Plus / Plus
Query: 1 ctgtgaatgaatgtggttttgagcctgttttctaagcacgtggtgccagccatctcaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgtgaatgaatgtggttttgagcctgttttctaagcacgtggtgccagccatctcaaac 260
Query: 61 acagaaagtgctggcgaaatggcaaggacgctgaaatccaccagcatacaccctggcaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acagaaagtgctggcgaaatggcaaggacgctgaaatccaccagcatacaccctggcaaa 320
Query: 121 gtcttctaaagaagaagtgcaagaggaacctgttgtggcagaaaggagagttccatcccc 180
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 321 gtcttctaaagaagaagtgcaagaggaacccgttgtggcagaaaggagagttccatcccc 380
Query: 181 agcgtggactatgaggaagacaccagccctggatgctatgttcaggagcagcagcacaca 240
|||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 381 agcgtggactatgaggaagacaccagccctggatgctacgctcaggagcagcagcacaca 440
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 640
Length adjustment: 9
Effective length of query: 231
Effective length of database: 631
Effective search space: 145761
Effective search space used: 145761
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
