Query= MSMg01no475_e24.b1 MSMg01no475_e24.b1 CHROMAT_FILE:
MSMg01no475_e24.b1 PHD_FILE: MSMg01no475_e24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:54:03 2005
(508 letters)
>mm_chr7_37278983_37279889
Length = 907
Score = 905 bits (468), Expect = 0.0
Identities = 495/504 (98%), Gaps = 1/504 (0%)
Strand = Plus / Minus
Query: 5 gaattcacagcatctcttgcgtgactcatgctgctagagctctagccagccctgttctct 64
|||||||||||||| | || ||||||||||||| ||||||||||||||||||||||||||
Sbjct: 707 gaattcacagcatc-catgggtgactcatgctgttagagctctagccagccctgttctct 649
Query: 65 ggaagaggagatacaggaaagaggtcaaagagaagagcctagaatagcaagacccccacc 124
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 648 ggaagaggagatacaggaaagaggtcaaagagaagagcctagaacagcaagacccccacc 589
Query: 125 atgaagcagttcagtgagctcctgcttggctgcctcagttttctctttgatagatcagac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 atgaagcagttcagtgagctcctgcttggctgcctcagttttctctttgatagatcagac 529
Query: 185 cgttctccatgggtccatttacctaaatgagatgcgaacagaggttagaacagattcctg 244
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 cattctccatgggtccatttacctaaatgagatgcgaacagaggttagaacagattcctg 469
Query: 245 ttggtggcaaggaaaccattttagatgtcgacatgtggcttaggtccattatctctttat 304
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 468 ttggtggcaaggaaaccattttagatgtcgacatgtggcaaaggtccattatctctttat 409
Query: 305 catgaaaaacaaacagcagctttcctgacgtgcttaaggaaagctaaggccaactttcca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 catgaaaaacaaacagcagctttcctgacgtgcttaaggaaagctaaggccaactttcca 349
Query: 365 tgtctgccttcttttgcagacacaaagaggagtcctcctcagccctggaccagctccaaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 tgtctgccttcttttgcagacacaaagaggagtcctcctcagccctggaccagctccaaa 289
Query: 425 gactttcttctgtttacttgttagcccatcttcctgtctcaccctactggaagcagaagg 484
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 gactttcttctgttaacttgttagcccatcttcctgtctcaccctactggaagcagaagg 229
Query: 485 tacttgtgtgttgttccatttagc 508
||||||||||||||||||||||||
Sbjct: 228 tacttgtgtgttgttccatttagc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 508
Length of database: 907
Length adjustment: 10
Effective length of query: 498
Effective length of database: 897
Effective search space: 446706
Effective search space used: 446706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no475_e24.g1 MSMg01no475_e24.g1 CHROMAT_FILE:
MSMg01no475_e24.g1 PHD_FILE: MSMg01no475_e24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:54:03 2005
(389 letters)
>mm_chr7_37115188_37115976
Length = 789
Score = 745 bits (385), Expect = 0.0
Identities = 388/389 (99%)
Strand = Plus / Plus
Query: 1 ctcttgttcacctaagaggggggaaatatcccccacaacactccacaactctttcttgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctcttgttcacctaagaggggggaaatatcccccacaacactccacaactctttcttgcc 260
Query: 61 tgtgcgtggtcatctctgcagagataactgtcgccctcccagactattgcttggaggagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtgcgtggtcatctctgcagagataactgtcgccctcccagactattgcttggaggagg 320
Query: 121 gtaacgatgtgtctgggacagaaaaatatgaaagactgaatgaagctgccttgggtgaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtaacgatgtgtctgggacagaaaaatatgaaagactgaatgaagctgccttgggtgaaa 380
Query: 181 caaagctttggcagtaatttataacaatgacatagaagagaagtttctctaaatgaggca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caaagctttggcagtaatttataacaatgacatagaagagaagtttctctaaatgaggca 440
Query: 241 ttcagatagccaaaccagtcatttatcgtaatgattaatacaaatggtattcataataat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttcagatagccaaaccagtcatttatcgtaatgattaatacaaatggtattcataataat 500
Query: 301 aaatatcacagccccaacgtacggcacagagcaagagcctggattcgctgagctgagggt 360
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaatatcacagccccagcgtacggcacagagcaagagcctggattcgctgagctgagggt 560
Query: 361 tctgagatgaacatcctacacgtgcctga 389
|||||||||||||||||||||||||||||
Sbjct: 561 tctgagatgaacatcctacacgtgcctga 589
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 389
Length of database: 789
Length adjustment: 9
Effective length of query: 380
Effective length of database: 780
Effective search space: 296400
Effective search space used: 296400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
