Query= MSMg01no475_m20.b1 MSMg01no475_m20.b1 CHROMAT_FILE:
MSMg01no475_m20.b1 PHD_FILE: MSMg01no475_m20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:54:42 2005
(453 letters)
>mm_chr7_96430670_96431523
Length = 854
Score = 808 bits (418), Expect = 0.0
Identities = 442/450 (98%), Gaps = 1/450 (0%)
Strand = Plus / Minus
Query: 5 gaattcagagtgg-atttccatatttcctctgcttttcaactttataagtaaatcaaagt 63
||||||||||||| | || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gaattcagagtggaaattaaatatttcctctgcttttcaactttataagtaaatcaaagt 445
Query: 64 agcttcaggcttgttattgatggcctgaatgagtcatttttaaaaagccctgggtgaagg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 agcttcaggcttgttattgatggcctgaatgagtcatttttaaaaagccctgggtgaagg 385
Query: 124 agaaggatagaggggttcacagagaccctctcacaagccaagagtttatatttaagtttg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 agaaggatagaggggttcacagagaccctctcacaagccaagagtttatatttaagtttg 325
Query: 184 ttcatctttgtatgcatatctctgcttaaagcccagggaattatccttctgtaaattata 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ttcatctttgtatgcatatctctgcttaaagcccagggaattatccttctgtaaattata 265
Query: 244 actgacaacttgataaaagcaaccttatagatattatcttattttaaaacataagaagat 303
|||||||||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 264 actgacaacttgataaaagcaaccttatagatattatcataacttaaaacataagaagat 205
Query: 304 tgtgtgtgagtatgtgtgtgtgcgcacgctcatgtgttgaggactacatttgagggtctg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 tgtgtgtgagtatgtgtgtgtgcgcacgctcatgtgttgaggactacatttgagggtctg 145
Query: 364 ttctctccttcctgtgagggccatggggagtgaactcaggttgtcaggattgatacccgg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 144 ttctctccttcctgtgagggccatggggagtgaactcaggttgtcaggattgatacctgg 85
Query: 424 tacctctaccttatgaaccatctttctggc 453
||||||||||||||||||||||||||||||
Sbjct: 84 tacctctaccttatgaaccatctttctggc 55
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 453
Length of database: 854
Length adjustment: 10
Effective length of query: 443
Effective length of database: 844
Effective search space: 373892
Effective search space used: 373892
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no475_m20.g1 MSMg01no475_m20.g1 CHROMAT_FILE:
MSMg01no475_m20.g1 PHD_FILE: MSMg01no475_m20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:54:42 2005
(410 letters)
>mm_chr7_96260403_96261212
Length = 810
Score = 793 bits (410), Expect = 0.0
Identities = 410/410 (100%)
Strand = Plus / Plus
Query: 1 cttcagcatgtgccagctgtgagaggccgatggcttagactaaatccctggtatctgtgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttcagcatgtgccagctgtgagaggccgatggcttagactaaatccctggtatctgtgt 260
Query: 61 gcttggtttcttttctttcattaggactaagagccacagcagactgtgggctgcaattcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcttggtttcttttctttcattaggactaagagccacagcagactgtgggctgcaattcc 320
Query: 121 acagtgttgttaaggtggcaaagcctctacctggctcctatgactgtccaccagcgatga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acagtgttgttaaggtggcaaagcctctacctggctcctatgactgtccaccagcgatga 380
Query: 181 gtggggaagacagccctgcagagactttcaggctccctcccatctctctgcaagagtcca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtggggaagacagccctgcagagactttcaggctccctcccatctctctgcaagagtcca 440
Query: 241 tctctctcccataattcttcaagcatttctcttacatctgctctcaaggagtggagaagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctctctcccataattcttcaagcatttctcttacatctgctctcaaggagtggagaagt 500
Query: 301 ttccccaatgaaggttaaatgatttatactgaaaatcagtgtacaataggtatgtatgga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttccccaatgaaggttaaatgatttatactgaaaatcagtgtacaataggtatgtatgga 560
Query: 361 tatatgagcagttagaatgaatggctatgtttgactataatttaattaca 410
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tatatgagcagttagaatgaatggctatgtttgactataatttaattaca 610
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 410
Length of database: 810
Length adjustment: 9
Effective length of query: 401
Effective length of database: 801
Effective search space: 321201
Effective search space used: 321201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
