Query= MSMg01no477_b21.b1 MSMg01no477_b21.b1 CHROMAT_FILE:
MSMg01no477_b21.b1 PHD_FILE: MSMg01no477_b21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:56:28 2005
(666 letters)
>mm_chr7_123514544_123515609
Length = 1066
Score = 1180 bits (610), Expect = 0.0
Identities = 639/654 (97%), Gaps = 9/654 (1%)
Strand = Plus / Minus
Query: 13 ggaattctcctccagatatggagtcataagtgattgtgtactacctaatatgggtcgtag 72
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1055 ggaattctcctccagaaatggagtcataagtgattgtgtactacctaatatgggtcgtag 996
Query: 73 gaactaaggtcatttataagagcagcaagtactttaaaccactgagccatctctctatcc 132
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 995 gaactaaggtcatttataagagcagcaagtactctaaaccactgagccatctctctatcc 936
Query: 133 tttattcatacatgcatacgcaaaaaatttaaatattaatcttggaaaaaagaactttaa 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 935 tttattcatacatgcatacgcaaaaaatttaaatattaatcttggaaaaaagaactttaa 876
Query: 193 tttatcaacgtatataacttaattgttttaaatagttgctagttcgagaataaggatcaa 252
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 875 tttatcaaagtatataacttaattgttttaaatagttgctagttcgagaataaggatcaa 816
Query: 253 tgtatgttttgagtcctactgcccccctttttttttttttttttaacattcagttatagt 312
|||||||||||||||| ||||||| |||||||||||||||||||||||||||
Sbjct: 815 tgtatgttttgagtcccactgccc---------tttttttttttaacattcagttatagt 765
Query: 313 gtatgtgtgtgggtgagtcagaaggtagtttgcagaagttagttcttttcttccacagtg 372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 gtatgtgtgtgggtgagtcagaaggtagtttgcagaagttagttcttttcttccacagtg 705
Query: 373 taggtttggaattgattacaagagctaagacatcttaccaatcccacttcctgtttttaa 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 taggtttggaattgattacaagagctaagacatcttaccaatcccacttcctgtttttaa 645
Query: 433 taaatatattttgttatatcatacaacatactcatttatatatcattcttaagtacttta 492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 taaatatattttgttatatcatacaacatactcatttatatatcattcttaagtacttta 585
Query: 493 tattactatagccaaatgaagacgttgcaacagagactgttatagctgagattataaata 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 tattactatagccaaatgaagacgttgcaacagagactgttatagctgagattataaata 525
Query: 553 tgtgctaccatgtccagccttttaaactatatttattcatttaaatttactttatgtatg 612
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 524 tgtgctaccatgtccagccttttaaactgtatttattcatttaaatttactttatgtatg 465
Query: 613 tgaacattttgcctgcaaggatgtctgtataccatgtacctacatgcatagtaa 666
||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 464 tgaacattttgcctgcaaggatgtctgtataccatgtacatacatgcatagtaa 411
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1066
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1056
Effective search space: 692736
Effective search space used: 692736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no477_b21.g1 MSMg01no477_b21.g1 CHROMAT_FILE:
MSMg01no477_b21.g1 PHD_FILE: MSMg01no477_b21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:56:28 2005
(648 letters)
>mm_chr7_123364298_123365345
Length = 1048
Score = 1162 bits (601), Expect = 0.0
Identities = 633/649 (97%), Gaps = 10/649 (1%)
Strand = Plus / Plus
Query: 1 ctaagctttggcttccctcaatagactgtgtattcaggatatgtaagccagataaaccta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctaagctttggcttccctcaatagactgtgtattcaggatatgtaagccagataaaccta 260
Query: 61 ttctctacacgttgtttgtggtcatggtgcttcatcgaagcaacagggacagagtttgag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttctctacacgttgtttgtggtcatggtgcttcatcgaagcaacagggacagagtttgag 320
Query: 121 gtcatggtaaaaagcaaaaggagattccagcttctctgtccactcctttaccaggcctcc 180
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtcacggtaaaaagcaaaaggagattccagcttctctgtccactcctttaccaggcctcc 380
Query: 181 acacaagaactggggcccttttatgtctttgcctttccccccttgagatgttctagggat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acacaagaactggggcccttttatgtctttgcctttccccccttgagatgttctagggat 440
Query: 241 caaagacaatcatgtgtgtgttgtgtgtactctggtaaaactccacc-agtttaagttta 299
||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 441 caaagacaatcatgtgtgtgttgtgtgtactctggtaaaactccaccca---------ta 491
Query: 300 agttactgagagcaagactggttcccaagacctacagagcagctgcagcagcccccatgt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 agttactgagagcaagactggttcccaagacctacagagcagctgcagcagcccccatgt 551
Query: 360 ccttcctgacctaccccaccctcaggcacagcagctggaaggtggagatgtcacaccaga 419
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 552 ccttcctgacctaccccaccctcaggcacagcagctggaaggtggagatgtcacgccaga 611
Query: 420 gccttagaacctggagtgcctggcccttctcactctgccctgtgacgcctcagatatcct 479
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 gccttagaacctagagtgcctggcccttctcactctgccctgtgacgcctcagatatcct 671
Query: 480 gcgcctctgggaagactacacactagctgagtctgctccaagcgcacctaggagcttctc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 gcgcctctgggaagactacacactagctgagtctgctccaagcgcacctaggagcttctc 731
Query: 540 tgcaggctagtactggtttctcacctaactctctgtgaaagccagcaacatgggggaaaa 599
|||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 732 tgcaggctagtactggcttctcacctaattctctgtgaaagccagcaacatgggggaaaa 791
Query: 600 aaggtgtctgcgacttggttttcataaaagatttgacagcccttcagaa 648
||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 792 aaggtgtctgcaacttggttttcataaaagatttgacagcccttcagaa 840
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1048
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1038
Effective search space: 662244
Effective search space used: 662244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
