Query= MSMg01no477_g17.b1 MSMg01no477_g17.b1 CHROMAT_FILE:
MSMg01no477_g17.b1 PHD_FILE: MSMg01no477_g17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:56:51 2005
(527 letters)
>mm_chr7_25511052_25511978
Length = 927
Score = 961 bits (497), Expect = 0.0
Identities = 520/529 (98%), Gaps = 4/529 (0%)
Strand = Plus / Plus
Query: 1 attcagatccctttac--aatcttctcaagcaaggcctcagcacctcagtcctcaggacc 58
||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attcagatccca--accgaatcttctcaagcaaggcctcagcacctcagtcctcaggacc 258
Query: 59 cagctccaccacaaccacaactggaattccgaaggcgctgctgtgtctgtcctaggaatg 118
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 259 cagctccaccacaaccacaactggaattccgaaggccctgctgtgtctgtcctaggaatg 318
Query: 119 tggcttttaggttccactcccacagccccgactccacaggacccaggagtctcctcacag 178
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
Sbjct: 319 tggcttttaggttccactcccacagccccgactccacaggaccctggagtctcctcaccg 378
Query: 179 agcctcctcctcggggcctcagaatacaatccttagccctgaccgcgaaggagtgcaatc 238
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 379 agcctcctcctcggggcctcagaatacaatcctcagccctgaccgcgaaggagtgcaatc 438
Query: 239 cccggcctccttcagtctcggctgctcagaccctagaggcttcccttagacacaaagtcc 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 cccggcctccttcagtctcggctgctcagaccctagaggcttcccttagacacaaagtcc 498
Query: 299 agagctgagctctctttaaagacgcagggaacaaacccctctccttgagaacaaaaccct 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 agagctgagctctctttaaagacgcagggaacaaacccctctccttgagaacaaaaccct 558
Query: 359 gctccctcagattagggtgtccatggcccaaatcgccctcaaaaccaagacttctgtacc 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 gctccctcagattagggtgtccatggcccaaatcgccctcaaaaccaagacttctgtacc 618
Query: 419 agtttaccctgcatcagactctatgccctagcccttgtcctgtgactaacgactcaagca 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 agtttaccctgcatcagactctatgccctagcccttgtcctgtgactaacgactcaagca 678
Query: 479 ggccccttccccctcctctctcctgctcctcctcattggcttctttcct 527
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 ggccccttccccctcctctctcctgctcctcctcattggcttctttcct 727
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 527
Length of database: 927
Length adjustment: 10
Effective length of query: 517
Effective length of database: 917
Effective search space: 474089
Effective search space used: 474089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no477_g17.g1 MSMg01no477_g17.g1 CHROMAT_FILE:
MSMg01no477_g17.g1 PHD_FILE: MSMg01no477_g17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:56:51 2005
(551 letters)
>mm_chr7_25646021_25646970
Length = 950
Score = 1015 bits (525), Expect = 0.0
Identities = 546/555 (98%), Gaps = 5/555 (0%)
Strand = Plus / Minus
Query: 1 tgggctcctccggagaccacccaggaggcttcctataccattcaggtccggggcttgtag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 tgggctcctccggagaccacccaggaggcttcctataccattcaggtccggggcttgtag 517
Query: 61 caacacactgaggcaggattgggtagaagtccttacagccaagtaggtaaccttgtgcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 caacacactgaggcaggattgggtagaagtccttacagccaagtaggtaaccttgtgcct 457
Query: 121 tcagggtccttgtcatagacatgactgcccactcccttcagtccaaagagtattctataa 180
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 456 tcagggtccttgtcatagacatgactgcccactccctccagtccaaagagtattctataa 397
Query: 181 ctgggctctggcagtggggctggctcccactggggtcagagtcttggagcagcactcatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 ctgggctctggcagtggggctggctcccactggggtcagagtcttggagcagcactcatg 337
Query: 241 gcctcttttggggctggggctggtccttgtccaggtcacctcagaaaaatggtgaagcgc 300
||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 gcc-caggtggggctggggctggtccttgtccaggtcacctcagaaaaatggtgaagcgc 278
Query: 301 acaccatttgggtgcatcgaggacacatgttgggctctctggtgaacacagagagactgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 acaccatttgggtgcatcgaggacacatgttgggctctctggtgaacacagagagactgg 218
Query: 361 aggttttgttgggactc----tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 416
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 217 aggttttgttgggactctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 158
Query: 417 gtactgctggcctcctcatccttcctttggagcactgggatgatctgaaagccctaggtc 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 gtactgctggcctcctcatccttcctttggagcactgggatgatctgaaagccctaggtc 98
Query: 477 agaggcatctcatagagatggatactggcacctctgatagtcatgtcaaacagaatggca 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97 agaggcatctcatagagatggatactggcacctctgatagtcatgtcaaacagaatggca 38
Query: 537 tagcagggcatgtgg 551
|||||||||||||||
Sbjct: 37 tagcagggcatgtgg 23
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 60
Number of extensions: 16
Number of successful extensions: 16
Number of sequences better than 10.0: 1
Number of HSP's gapped: 9
Number of HSP's successfully gapped: 1
Length of query: 551
Length of database: 950
Length adjustment: 10
Effective length of query: 541
Effective length of database: 940
Effective search space: 508540
Effective search space used: 508540
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
