Query= MSMg01no477_i16.b1 MSMg01no477_i16.b1 CHROMAT_FILE:
MSMg01no477_i16.b1 PHD_FILE: MSMg01no477_i16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:57:01 2005
(543 letters)
>mm_chr7_149745489_149746431
Length = 943
Score = 1019 bits (527), Expect = 0.0
Identities = 539/543 (99%)
Strand = Plus / Minus
Query: 1 aggccttttactttattgtgttgtgatatgtaacaaactaagccacacaagcacatagct 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 743 aggccttttactttattgtgttgtgatatgtaacaaactaaaccacacaagcacatagct 684
Query: 61 tagtggtaataggtgtgagcccagtgctgagcagtgtctaagagttttatcttcctctct 120
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 683 gagtggtaataggtgtgagcccagtgctgggcagtgtctaagagttttatcttcctctct 624
Query: 121 ggctgcagctccaaggcctcccaacttgcttgctcttctctctcagggcagagtggatgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 ggctgcagctccaaggcctcccaacttgcttgctcttctctctcagggcagagtggatgc 564
Query: 181 agaggtggtcctgtgtggtgaagggactggagtctgtcatctcacctcttaggcagatgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 agaggtggtcctgtgtggtgaagggactggagtctgtcatctcacctcttaggcagatgg 504
Query: 241 attgagagccaggagaggcaggcaaagaaccaggccctgcagaacctagggctgtgtcct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 attgagagccaggagaggcaggcaaagaaccaggccctgcagaacctagggctgtgtcct 444
Query: 301 ggagattgcacagcagagtaggccctgcaacctgacccatcccttccctgggtcccacct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ggagattgcacagcagagtaggccctgcaacctgacccatcccttccctgggtcccacct 384
Query: 361 gccggccagggtcccagcaaaaccctgacagctgaggagtcacaccttcccaactctggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gccggccagggtcccagcaaaaccctgacagctgaggagtcacaccttcccaactctggt 324
Query: 421 tgtcattagctgctcctggcgggaggtggaggggtggaggattggctcccgcagccagca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tgtcattagctgctcctggcgggaggtggaggggtggaggattggctcccgcagccagca 264
Query: 481 aggatctaggctcacgtgaggccacctggacctcattattcttaagtggtccagtctgag 540
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 aggatcgaggctcacgtgaggccacctggacctcattattcttaagtggtccagtctgag 204
Query: 541 ttt 543
|||
Sbjct: 203 ttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 543
Length of database: 943
Length adjustment: 10
Effective length of query: 533
Effective length of database: 933
Effective search space: 497289
Effective search space used: 497289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no477_i16.g1 MSMg01no477_i16.g1 CHROMAT_FILE:
MSMg01no477_i16.g1 PHD_FILE: MSMg01no477_i16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:57:01 2005
(648 letters)
>mm_chr7_149600881_149601929
Length = 1049
Score = 1201 bits (621), Expect = 0.0
Identities = 642/649 (98%), Gaps = 2/649 (0%)
Strand = Plus / Plus
Query: 1 gtaatgggtgactacctgctaattccatcctctcctccctccctgtcacaatggccgatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtaatgggtgactacctgctaattccatcctctcctccctccctgtcacaatggccgatt 260
Query: 61 ttcctctaagtacagctttatcagctgcattccttaaacttggacagactcaggaaatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttcctctaagtacagctttatcagctgcattccttaaacttggacagactcaggaaatat 320
Query: 121 gatatatttcattattgctccattttcaattccacctcatttcccagatgacttattctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gatatatttcattattgctccattttcaattccacctcatttcccagatgacttattctt 380
Query: 181 tagccttcaactgtttagaaggtctttgcttcagtgtttcggttaccttcattttggttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagccttcaactgtttagaaggtctttgcttcagtgtttcggttaccttcattttggttt 440
Query: 241 tc-aatatgagaacactctgttcagattgagatctgtacgacacaaataggcaagagact 299
|| || | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tccaacacgagaacactctgttcagattgagatctgtacgacacaaataggcaagagact 500
Query: 300 tgaatgaacggaagttctcagggggaaaaaaaagccacacctttgttaaagcttctacaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgaatgaacggaagttctcagggggaaaaaaaagccacacctttgttaaagcttctacaa 560
Query: 360 gctgattgactgataagagctgctgtgattgtggggagctggaatgctgcagatccagag 419
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gctgattggctgataagagctgctgtgattgtggggagctggaatgctgcagatccagag 620
Query: 420 ccaaattaacttgggcaataattagccttataaaaagccctttattgcctatcttgtgtg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ccaaattaacttgggcaataattagccttataaaaagccctttattgcctatcttgtgtg 680
Query: 480 tgacctaacaaattattttaaaatgcactgacttaaaggacctctagtttctactgaccc 539
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgacctaa-aaattattttaaaatgcactgacttaaaggacctctagtttctactgaccc 739
Query: 540 aaaggctaaaaatgtcatcagatagcatctaaggcttataggagagactcccctactttt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 aaaggctaaaaatgtcatcagatagcatctaaggcttataggagagactcccctactttt 799
Query: 600 ctgtaacctgcctacctgatgtttgcaccaaggtatttaaaaatgtatt 648
||||||||||||||||||||||||||| |||||||||| ||||||||||
Sbjct: 800 ctgtaacctgcctacctgatgtttgcatcaaggtatttgaaaatgtatt 848
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1049
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1039
Effective search space: 662882
Effective search space used: 662882
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
