ATGTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTTCATCATTCCTAGAGAACATTCTCACCAGCCCCAGACAATCGC
TGACTCTATACCCTGCCTCAGTTTACCCTGGATGTCAAAGCTGGTCTTTG
ACATGAAAGTTAGCAGGGAGGGTGGCTTATTTTAGGTGTCAGGACCTCAT
ACATGCTCCAAAAGCACCTGACCAGCCTTTCTGCGTGCATTTTAAAGACA
GACATGATTTAGAGCCCAGAGAAGTGAGGTGAGTTGCTAGGGCCCACTGT
CACTGAGTTTGGTTCATCAGGCCCTGGCTTTGAGGACCAGGGAGGTAAGT
AAACTGTCAGGAGAGGGGGCATCAAAGGATTCAAAAGAGATGACCTGCTG
AGCCCTTCATAGAACCTTTGCGGGAGGAGGGGGGCTGGAAGAAAGTGGGG
CCTCCTTGGGAAGCAATCACATGGCAGGTGATGCTGAAGGAACCCCTCCA
TTCCTCCTTATGCATCTCTGAGCCCCCCAGCCTGAGAAAGCAGAGGTGAG
AACAGGGATCGCTGTGTGGCTACACTGTGGAGTTTCTAATGCATTGCCTG
TTTGCTCTTCCACGACTTCTGCTTTGGGAGCACAAATCAATTCGACTTTC
TATTCTGACTACCTCATCTTTCATCTATCTAAATGCCAGAGAATATGAAG
TGATGGGCCCCCAGAGAGACCTTGTTTCCCATGCCAA

NCACGATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXCACAGTCTCAGCTCACAGAAGCA
GAGTCCATATGTGCCACACCAACTCCAGTAGAATTTGTGTGACAAGTTTC
ACAGACTGAGGCGAAAACTTCAAAAGAAGGAGGCCTCCTGGAACAGGTTG
TGGAACTCTTGGTCAGAGAAAAAATATTGAGCAATTTCAAAATTCTCAAG
GCAATTTATCTTCTTTTATTCTTTTTCTTACAAGATGTTCTTGATGGCCT
AGGCTAAGATCTTAAGTGAGAATAATGGGTACAAGACCATCCCCTGAAAT
AGTCACTAAATATGACCTTTAGTGACCAGCCCTTCACTTTATAAATCATT
TACAAGATAGTATTGATAGATAAAAGCTTTCCTAACAATTAAATTTCGTA
TGGCTACAGGTGTGTCATCAGAAGTGGACTTTGGTATATTGTTTTAGAAA
GCTTTAAATAAAAAGAATTAAAATAGTTTAAATTTACACTTTGAAGATTC
ACAAAAAGAACTGGATGCTAAATAATAACTGACCATAAAAATTTATGAAC
CTATTCTTGGAATTATGCTGCTAGCCTTGGACTTACTGTGCCAAATGACT
ATGATATCTGTCCTATTCGTGACTGTTTCATTGAACATATCTTCTTAGAG
TTATAATAATTGTTTGTTTATGTGTAAAAAACCCTTGCTTGAGAACT

Query= MSMg01no477_j19.b1 MSMg01no477_j19.b1 CHROMAT_FILE:
MSMg01no477_j19.b1 PHD_FILE: MSMg01no477_j19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:57:06 2005
         (684 letters)



>mm_chr7_86145465_86146544
          Length = 1080

 Score = 1218 bits (630), Expect = 0.0
 Identities = 669/684 (97%), Gaps = 4/684 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttcttcatcattcctagagaacattctcaccagccccagacaatcgctgactctataccc 60
           |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcttcatcggtcctagagaacattctcaccagccccagacaatcgctgactctataccc 260

                                                                       
Query: 61  tgcctcagtttaccctggatgtcaaagctggtctttgacatgaaagttagcagggagggt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgcctcagtttaccctggatgtcaaagctggtctttgacatgaaagttagcagggagggt 320

                                                                       
Query: 121 ggcttattttaggtgtcaggacctcatacatgctccaaaagcacctgaccagcctttctg 180
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 321 ggcttattttaggtgtcaggacctcatacatgctccaaaagcacttgaccagcctttctg 380

                                                                       
Query: 181 cgtgcattttaaagacagacatgatttagagcccagagaagtgaggtgagttgctagggc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cgtgcattttaaagacagacatgatttagagcccagagaagtgaggtgagttgctagggc 440

                                                                       
Query: 241 ccactgtcactgagtttggttcatcaggccctggctttgaggaccagggaggtaagtaaa 300
           ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccactatcactgggtttggttcatcaggccctggctttgaggaccagggaggtaagtaaa 500

                                                                       
Query: 301 ctgtcaggagagggggcatcaaaggattcaaaagagatgacctgctgagcccttcataga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctgtcaggagagggggcatcaaaggattcaaaagagatgacctgctgagcccttcataga 560

                                                                       
Query: 361 acctttgcgggaggaggggggctggaagaaagtggggcctccttgggaagcaatcacatg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acctttgcgggaggaggggggctggaagaaagtggggcctccttgggaagcaatcacatg 620

                                                                       
Query: 421 gcaggtgatgctgaaggaacccctccattcctccttatgcatctctgagccccccagcct 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gcaggtgatgctgaaggaacccctccattcctccttatgcatctctgagccccccagcct 680

                                                                       
Query: 481 gagaaagcagaggtgagaacagggatcgctgtgtggctacactgtggagtttctaatgca 540
           ||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||
Sbjct: 681 gagaaagcagaggtgagcacaggtattgctgtgtggctacactgtggagtttctaatgca 740

                                                                       
Query: 541 ttgcctgtttgctcttccacgacttctgctttgggagcacaaatcaattcgactttctat 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ttgcctgtttgctcttccacgacttctgctttgggagcacaaatcaattcgactttctat 800

                                                                       
Query: 601 tctgactacctcatctttcatctatctaaatgccagagaatatgaagtgatgggccccca 660
           || |||||||||||||||||||||    |||||| |||||||||||||||||||||||||
Sbjct: 801 tcggactacctcatctttcatcta----aatgccggagaatatgaagtgatgggccccca 856

                                   
Query: 661 gagagaccttgtttcccatgccaa 684
           |||||||||| |||||||||||||
Sbjct: 857 gagagaccttctttcccatgccaa 880


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 684
Length of database: 1080
Length adjustment: 10
Effective length of query: 674
Effective length of database: 1070
Effective search space:   721180
Effective search space used:   721180
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)